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velvetoptimiser 2.2.6-2
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  • sloc: perl: 1,291; sh: 39; makefile: 6
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Source: velvetoptimiser
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Tim Booth <tbooth@ceh.ac.uk>,
           Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 11~)
Standards-Version: 4.1.4
Vcs-Browser: https://salsa.debian.org/med-team/velvetoptimiser
Vcs-Git: https://salsa.debian.org/med-team/velvetoptimiser.git
Homepage: https://github.com/tseemann/VelvetOptimiser/

Package: velvetoptimiser
Architecture: all
Depends: ${shlibs:Depends},
         ${misc:Depends},
         velvet,
         bioperl
Description: automatically optimise Velvet do novo assembly parameters
 VelvetOptimiser is a multi-threaded Perl script for automatically optimising
 the three primary parameter options (K, -exp_cov, -cov_cutoff) for the Velvet
 de novo sequence assembler.