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Description: Fix build failures with Gcc 15.
Starting with Gcc 15, construction of veryfasttree fails. The
relevant errors look like:
.
src/DiskMemory.h:17:9: error: ‘uintptr_t’ does not name a type
17 | uintptr_t ptr();
| ^~~~~~~~~
src/DiskMemory.h:10:1: note: ‘uintptr_t’ is defined in header ‘<cstdint>’; this is probably fixable by adding ‘#include <cstdint>’
9 | #include <string>
+++ |+#include <cstdint>
10 |
.
Applying compiler hints resolves the issue.
Author: Étienne Mollier <emollier@debian.org>
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1098063
Forwarded: https://github.com/citiususc/veryfasttree/pull/25
Last-Update: 2025-04-06
---
This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
--- veryfasttree.orig/src/DiskMemory.h
+++ veryfasttree/src/DiskMemory.h
@@ -3,6 +3,7 @@
#ifndef VERYFASTTREE_DISKMEMORY_H
#define VERYFASTTREE_DISKMEMORY_H
+#include <cstdint>
#include <fcntl.h>
#include <memory>
#include <sys/mman.h>
--- veryfasttree.orig/src/NeighbourJoining.h
+++ veryfasttree/src/NeighbourJoining.h
@@ -6,6 +6,7 @@
#include "TransitionMatrix.h"
#include "HashTable.h"
#include "Alignment.h"
+#include <cstdint>
#include <vector>
#include <list>
#include <iostream>
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