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<div class="title">fspai.hpp</div>  </div>
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<a href="fspai_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="preprocessor">#ifndef VIENNACL_LINALG_DETAIL_SPAI_FSPAI_HPP</span></div>
<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="preprocessor">#define VIENNACL_LINALG_DETAIL_SPAI_FSPAI_HPP</span></div>
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;</div>
<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">/* =========================================================================</span></div>
<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">   Copyright (c) 2010-2016, Institute for Microelectronics,</span></div>
<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">                            Institute for Analysis and Scientific Computing,</span></div>
<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">                            TU Wien.</span></div>
<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">   Portions of this software are copyright by UChicago Argonne, LLC.</span></div>
<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">                            -----------------</span></div>
<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">                  ViennaCL - The Vienna Computing Library</span></div>
<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">                            -----------------</span></div>
<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment">   Project Head:    Karl Rupp                   rupp@iue.tuwien.ac.at</span></div>
<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">   (A list of authors and contributors can be found in the manual)</span></div>
<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment">   License:         MIT (X11), see file LICENSE in the base directory</span></div>
<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">============================================================================= */</span></div>
<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;</div>
<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="preprocessor">#include &lt;utility&gt;</span></div>
<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="preprocessor">#include &lt;iostream&gt;</span></div>
<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="preprocessor">#include &lt;fstream&gt;</span></div>
<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="preprocessor">#include &lt;string&gt;</span></div>
<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="preprocessor">#include &lt;algorithm&gt;</span></div>
<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;<span class="preprocessor">#include &lt;vector&gt;</span></div>
<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="preprocessor">#include &lt;math.h&gt;</span></div>
<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;<span class="preprocessor">#include &lt;map&gt;</span></div>
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;</div>
<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="comment">//boost includes</span></div>
<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/vector.hpp&quot;</span></div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/matrix.hpp&quot;</span></div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/matrix_proxy.hpp&quot;</span></div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/vector_proxy.hpp&quot;</span></div>
<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/storage.hpp&quot;</span></div>
<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/io.hpp&quot;</span></div>
<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/lu.hpp&quot;</span></div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/triangular.hpp&quot;</span></div>
<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;<span class="preprocessor">#include &quot;boost/numeric/ublas/matrix_expression.hpp&quot;</span></div>
<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;</div>
<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;<span class="comment">// ViennaCL includes</span></div>
<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="prod_8hpp.html">viennacl/linalg/prod.hpp</a>&quot;</span></div>
<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="matrix_8hpp.html">viennacl/matrix.hpp</a>&quot;</span></div>
<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="compressed__matrix_8hpp.html">viennacl/compressed_matrix.hpp</a>&quot;</span></div>
<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="sparse__matrix__operations_8hpp.html">viennacl/linalg/sparse_matrix_operations.hpp</a>&quot;</span></div>
<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="matrix__operations_8hpp.html">viennacl/linalg/matrix_operations.hpp</a>&quot;</span></div>
<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="scalar_8hpp.html">viennacl/scalar.hpp</a>&quot;</span></div>
<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="cg_8hpp.html">viennacl/linalg/cg.hpp</a>&quot;</span></div>
<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="inner__prod_8hpp.html">viennacl/linalg/inner_prod.hpp</a>&quot;</span></div>
<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="ilu_8hpp.html">viennacl/linalg/ilu.hpp</a>&quot;</span></div>
<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;<span class="comment">//#include &lt;omp.h&gt;</span></div>
<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;</div>
<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;<span class="keyword">namespace </span>viennacl</div>
<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;{</div>
<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;<span class="keyword">namespace </span>linalg</div>
<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160;{</div>
<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;<span class="keyword">namespace </span>detail</div>
<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;{</div>
<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;<span class="keyword">namespace </span>spai</div>
<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;{</div>
<div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;</div>
<div class="line"><a name="l00071"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html">   71</a></span>&#160;<span class="keyword">class </span><a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html">fspai_tag</a></div>
<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;{</div>
<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;<span class="keyword">public</span>:</div>
<div class="line"><a name="l00081"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a71bd4d8f9e2b2530c4ac0aa9f220fb4d">   81</a></span>&#160;  <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a71bd4d8f9e2b2530c4ac0aa9f220fb4d">fspai_tag</a>(</div>
<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;          <span class="keywordtype">double</span> residual_norm_threshold = 1e-3,</div>
<div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;          <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> iteration_limit = 5,</div>
<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;          <span class="keywordtype">bool</span> is_static = <span class="keyword">false</span>,</div>
<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;          <span class="keywordtype">bool</span> is_right = <span class="keyword">false</span>)</div>
<div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;    : residual_norm_threshold_(residual_norm_threshold),</div>
<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;      iteration_limit_(iteration_limit),</div>
<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;      is_static_(is_static),</div>
<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;      is_right_(is_right) {}</div>
<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;</div>
<div class="line"><a name="l00091"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a343d50ea020c9858992c2b9998de029d">   91</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">double</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a343d50ea020c9858992c2b9998de029d">getResidualNormThreshold</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> residual_norm_threshold_; }</div>
<div class="line"><a name="l00092"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#adac97317085425dccccd17b1101b48b5">   92</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#adac97317085425dccccd17b1101b48b5">getIterationLimit</a> ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> iteration_limit_; }</div>
<div class="line"><a name="l00093"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#ac6a4e2817d41685c01dbd3288fa2040b">   93</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">bool</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#ac6a4e2817d41685c01dbd3288fa2040b">getIsStatic</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> is_static_; }</div>
<div class="line"><a name="l00094"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#abc6969227f20fe566a6facb9c4c6c92a">   94</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">bool</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#abc6969227f20fe566a6facb9c4c6c92a">getIsRight</a>()<span class="keyword"> const  </span>{ <span class="keywordflow">return</span> is_right_; }</div>
<div class="line"><a name="l00095"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a5527a30c629f794f13da007a4aee9270">   95</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a5527a30c629f794f13da007a4aee9270">setResidualNormThreshold</a>(<span class="keywordtype">double</span> residual_norm_threshold)</div>
<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;  {</div>
<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;    <span class="keywordflow">if</span> (residual_norm_threshold &gt; 0)</div>
<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;      residual_norm_threshold_ = residual_norm_threshold;</div>
<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;  }</div>
<div class="line"><a name="l00100"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a3a77ab82209b48986e7259e0caf0d15b">  100</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a3a77ab82209b48986e7259e0caf0d15b">setIterationLimit</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> iteration_limit)</div>
<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;  {</div>
<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;    <span class="keywordflow">if</span> (iteration_limit &gt; 0)</div>
<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;      iteration_limit_ = iteration_limit;</div>
<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;  }</div>
<div class="line"><a name="l00105"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a9e946a528617beee32177ec12ba13a75">  105</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a9e946a528617beee32177ec12ba13a75">setIsRight</a>(<span class="keywordtype">bool</span> is_right)   { is_right_  = is_right; }</div>
<div class="line"><a name="l00106"></a><span class="lineno"><a class="line" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a168c2ef94e9bb8b5e110a4b50102c32e">  106</a></span>&#160;  <span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a168c2ef94e9bb8b5e110a4b50102c32e">setIsStatic</a>(<span class="keywordtype">bool</span> is_static) { is_static_ = is_static; }</div>
<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;</div>
<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;<span class="keyword">private</span>:</div>
<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;  <span class="keywordtype">double</span> residual_norm_threshold_;</div>
<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;  <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> iteration_limit_;</div>
<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;  <span class="keywordtype">bool</span> is_static_;</div>
<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;  <span class="keywordtype">bool</span> is_right_;</div>
<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;};</div>
<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;</div>
<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;</div>
<div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;<span class="comment">// Helper: Store A in an STL container of type, exploiting symmetry</span></div>
<div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;<span class="comment">// Reason: ublas interface does not allow to iterate over nonzeros of a particular row without starting an iterator1 from the very beginning of the matrix...</span></div>
<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> MatrixT, <span class="keyword">typename</span> NumericT&gt;</div>
<div class="line"><a name="l00121"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#af1ff03eb8bd6bd2f78f4738731394f7d">  121</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#af1ff03eb8bd6bd2f78f4738731394f7d">sym_sparse_matrix_to_stl</a>(MatrixT <span class="keyword">const</span> &amp; A, std::vector&lt;std::map&lt;unsigned int, NumericT&gt; &gt; &amp; STL_A)</div>
<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;{</div>
<div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;  STL_A.resize(A.size1());</div>
<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;  <span class="keywordflow">for</span> (<span class="keyword">typename</span> MatrixT::const_iterator1 row_it  = A.begin1();</div>
<div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;                                         row_it != A.end1();</div>
<div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;                                       ++row_it)</div>
<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;  {</div>
<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;    <span class="keywordflow">for</span> (<span class="keyword">typename</span> MatrixT::const_iterator2 col_it  = row_it.begin();</div>
<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;                                           col_it != row_it.end();</div>
<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;                                         ++col_it)</div>
<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;    {</div>
<div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;      <span class="keywordflow">if</span> (col_it.index1() &gt;= col_it.index2())</div>
<div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;        STL_A[col_it.index1()][<span class="keyword">static_cast&lt;</span><span class="keywordtype">unsigned</span> <span class="keywordtype">int</span><span class="keyword">&gt;</span>(col_it.index2())] = *col_it;</div>
<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;      <span class="keywordflow">else</span></div>
<div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;        <span class="keywordflow">break</span>; <span class="comment">//go to next row</span></div>
<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;    }</div>
<div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;  }</div>
<div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;}</div>
<div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;</div>
<div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;</div>
<div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;<span class="comment">// Generate index sets J_k, k=0,...,N-1</span></div>
<div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> MatrixT&gt;</div>
<div class="line"><a name="l00145"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ae5f2c2a17a35ffa9682589bc3bd692dc">  145</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ae5f2c2a17a35ffa9682589bc3bd692dc">generateJ</a>(MatrixT <span class="keyword">const</span> &amp; A, std::vector&lt;std::vector&lt;vcl_size_t&gt; &gt; &amp; J)</div>
<div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;{</div>
<div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;  <span class="keywordflow">for</span> (<span class="keyword">typename</span> MatrixT::const_iterator1 row_it  = A.begin1();</div>
<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;                                         row_it != A.end1();</div>
<div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160;                                       ++row_it)</div>
<div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;  {</div>
<div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;    <span class="keywordflow">for</span> (<span class="keyword">typename</span> MatrixT::const_iterator2 col_it  = row_it.begin();</div>
<div class="line"><a name="l00152"></a><span class="lineno">  152</span>&#160;                                           col_it != row_it.end();</div>
<div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;                                         ++col_it)</div>
<div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;    {</div>
<div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160;      <span class="keywordflow">if</span> (col_it.index1() &gt; col_it.index2()) <span class="comment">//Matrix is symmetric, thus only work on lower triangular part</span></div>
<div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;      {</div>
<div class="line"><a name="l00157"></a><span class="lineno">  157</span>&#160;        J[col_it.index2()].push_back(col_it.index1());</div>
<div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;        J[col_it.index1()].push_back(col_it.index2());</div>
<div class="line"><a name="l00159"></a><span class="lineno">  159</span>&#160;      }</div>
<div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160;      <span class="keywordflow">else</span></div>
<div class="line"><a name="l00161"></a><span class="lineno">  161</span>&#160;        <span class="keywordflow">break</span>; <span class="comment">//go to next row</span></div>
<div class="line"><a name="l00162"></a><span class="lineno">  162</span>&#160;    }</div>
<div class="line"><a name="l00163"></a><span class="lineno">  163</span>&#160;  }</div>
<div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;}</div>
<div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;</div>
<div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;</div>
<div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00168"></a><span class="lineno">  168</span>&#160;<span class="comment">// Extracts the blocks A(\tilde{J}_k, \tilde{J}_k) from A</span></div>
<div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;<span class="comment">// Sets up y_k = A(\tilde{J}_k, k) for the inplace-solution after Cholesky-factoriation</span></div>
<div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> NumericT, <span class="keyword">typename</span> MatrixT, <span class="keyword">typename</span> VectorT&gt;</div>
<div class="line"><a name="l00172"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#acd198c046af39cfe38f1aad62c0580ae">  172</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#acd198c046af39cfe38f1aad62c0580ae">fill_blocks</a>(std::vector&lt; std::map&lt;unsigned int, NumericT&gt; &gt; &amp; A,</div>
<div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;                 std::vector&lt;MatrixT&gt;                            &amp; blocks,</div>
<div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160;                 std::vector&lt;std::vector&lt;vcl_size_t&gt; &gt; <span class="keyword">const</span>     &amp; J,</div>
<div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160;                 std::vector&lt;VectorT&gt;                            &amp; Y)</div>
<div class="line"><a name="l00176"></a><span class="lineno">  176</span>&#160;{</div>
<div class="line"><a name="l00177"></a><span class="lineno">  177</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> k=0; k&lt;A.size(); ++k)</div>
<div class="line"><a name="l00178"></a><span class="lineno">  178</span>&#160;  {</div>
<div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160;    std::vector&lt;vcl_size_t&gt; <span class="keyword">const</span> &amp; Jk = J[k];</div>
<div class="line"><a name="l00180"></a><span class="lineno">  180</span>&#160;    VectorT &amp; yk = Y[k];</div>
<div class="line"><a name="l00181"></a><span class="lineno">  181</span>&#160;    MatrixT &amp; block_k = blocks[k];</div>
<div class="line"><a name="l00182"></a><span class="lineno">  182</span>&#160;</div>
<div class="line"><a name="l00183"></a><span class="lineno">  183</span>&#160;    yk.resize(Jk.size());</div>
<div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160;    block_k.resize(Jk.size(), Jk.size());</div>
<div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160;    block_k.clear();</div>
<div class="line"><a name="l00186"></a><span class="lineno">  186</span>&#160;</div>
<div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;Jk.size(); ++i)</div>
<div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160;    {</div>
<div class="line"><a name="l00189"></a><span class="lineno">  189</span>&#160;      <a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> row_index = Jk[i];</div>
<div class="line"><a name="l00190"></a><span class="lineno">  190</span>&#160;      std::map&lt;unsigned int, NumericT&gt; &amp; A_row = A[row_index];</div>
<div class="line"><a name="l00191"></a><span class="lineno">  191</span>&#160;</div>
<div class="line"><a name="l00192"></a><span class="lineno">  192</span>&#160;      <span class="comment">//fill y_k:</span></div>
<div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160;      yk[i] = A_row[<span class="keyword">static_cast&lt;</span><span class="keywordtype">unsigned</span> <span class="keywordtype">int</span><span class="keyword">&gt;</span>(k)];</div>
<div class="line"><a name="l00194"></a><span class="lineno">  194</span>&#160;</div>
<div class="line"><a name="l00195"></a><span class="lineno">  195</span>&#160;      <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> j=0; j&lt;Jk.size(); ++j)</div>
<div class="line"><a name="l00196"></a><span class="lineno">  196</span>&#160;      {</div>
<div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160;        <a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> col_index = Jk[j];</div>
<div class="line"><a name="l00198"></a><span class="lineno">  198</span>&#160;        <span class="keywordflow">if</span> (col_index &lt;= row_index &amp;&amp; A_row.find(static_cast&lt;unsigned int&gt;(col_index)) != A_row.end()) <span class="comment">//block is symmetric, thus store only lower triangular part</span></div>
<div class="line"><a name="l00199"></a><span class="lineno">  199</span>&#160;          block_k(i, j) = A_row[<span class="keyword">static_cast&lt;</span><span class="keywordtype">unsigned</span> <span class="keywordtype">int</span><span class="keyword">&gt;</span>(col_index)];</div>
<div class="line"><a name="l00200"></a><span class="lineno">  200</span>&#160;      }</div>
<div class="line"><a name="l00201"></a><span class="lineno">  201</span>&#160;    }</div>
<div class="line"><a name="l00202"></a><span class="lineno">  202</span>&#160;  }</div>
<div class="line"><a name="l00203"></a><span class="lineno">  203</span>&#160;}</div>
<div class="line"><a name="l00204"></a><span class="lineno">  204</span>&#160;</div>
<div class="line"><a name="l00205"></a><span class="lineno">  205</span>&#160;</div>
<div class="line"><a name="l00206"></a><span class="lineno">  206</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00207"></a><span class="lineno">  207</span>&#160;<span class="comment">// Perform Cholesky factorization of A inplace. Cf. Schwarz: Numerische Mathematik, vol 5, p. 58</span></div>
<div class="line"><a name="l00208"></a><span class="lineno">  208</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00209"></a><span class="lineno">  209</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> MatrixT&gt;</div>
<div class="line"><a name="l00210"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ac3aaf276d63d5442f2f95d060912c4ab">  210</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ac3aaf276d63d5442f2f95d060912c4ab">cholesky_decompose</a>(MatrixT &amp; A)</div>
<div class="line"><a name="l00211"></a><span class="lineno">  211</span>&#160;{</div>
<div class="line"><a name="l00212"></a><span class="lineno">  212</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> k=0; k&lt;A.size2(); ++k)</div>
<div class="line"><a name="l00213"></a><span class="lineno">  213</span>&#160;  {</div>
<div class="line"><a name="l00214"></a><span class="lineno">  214</span>&#160;    <span class="keywordflow">if</span> (A(k,k) &lt;= 0)</div>
<div class="line"><a name="l00215"></a><span class="lineno">  215</span>&#160;    {</div>
<div class="line"><a name="l00216"></a><span class="lineno">  216</span>&#160;      std::cout &lt;&lt; <span class="stringliteral">&quot;k: &quot;</span> &lt;&lt; k &lt;&lt; std::endl;</div>
<div class="line"><a name="l00217"></a><span class="lineno">  217</span>&#160;      std::cout &lt;&lt; <span class="stringliteral">&quot;A(k,k): &quot;</span> &lt;&lt; A(k,k) &lt;&lt; std::endl;</div>
<div class="line"><a name="l00218"></a><span class="lineno">  218</span>&#160;    }</div>
<div class="line"><a name="l00219"></a><span class="lineno">  219</span>&#160;</div>
<div class="line"><a name="l00220"></a><span class="lineno">  220</span>&#160;    assert(A(k,k) &gt; 0 &amp;&amp; <span class="keywordtype">bool</span>(<span class="stringliteral">&quot;Matrix not positive definite in Cholesky factorization.&quot;</span>));</div>
<div class="line"><a name="l00221"></a><span class="lineno">  221</span>&#160;</div>
<div class="line"><a name="l00222"></a><span class="lineno">  222</span>&#160;    A(k,k) = std::sqrt(A(k,k));</div>
<div class="line"><a name="l00223"></a><span class="lineno">  223</span>&#160;</div>
<div class="line"><a name="l00224"></a><span class="lineno">  224</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=k+1; i&lt;A.size1(); ++i)</div>
<div class="line"><a name="l00225"></a><span class="lineno">  225</span>&#160;    {</div>
<div class="line"><a name="l00226"></a><span class="lineno">  226</span>&#160;      A(i,k) /= A(k,k);</div>
<div class="line"><a name="l00227"></a><span class="lineno">  227</span>&#160;      <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> j=k+1; j&lt;=i; ++j)</div>
<div class="line"><a name="l00228"></a><span class="lineno">  228</span>&#160;        A(i,j) -= A(i,k) * A(j,k);</div>
<div class="line"><a name="l00229"></a><span class="lineno">  229</span>&#160;    }</div>
<div class="line"><a name="l00230"></a><span class="lineno">  230</span>&#160;  }</div>
<div class="line"><a name="l00231"></a><span class="lineno">  231</span>&#160;}</div>
<div class="line"><a name="l00232"></a><span class="lineno">  232</span>&#160;</div>
<div class="line"><a name="l00233"></a><span class="lineno">  233</span>&#160;</div>
<div class="line"><a name="l00234"></a><span class="lineno">  234</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00235"></a><span class="lineno">  235</span>&#160;<span class="comment">// Compute x in Ax = b, where A is already Cholesky factored (A = L L^T)</span></div>
<div class="line"><a name="l00236"></a><span class="lineno">  236</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00237"></a><span class="lineno">  237</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> MatrixT, <span class="keyword">typename</span> VectorT&gt;</div>
<div class="line"><a name="l00238"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a097e316b51cf3854abec362e6a6d1d47">  238</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a097e316b51cf3854abec362e6a6d1d47">cholesky_solve</a>(MatrixT <span class="keyword">const</span> &amp; L, VectorT &amp; b)</div>
<div class="line"><a name="l00239"></a><span class="lineno">  239</span>&#160;{</div>
<div class="line"><a name="l00240"></a><span class="lineno">  240</span>&#160;  <span class="comment">// inplace forward solve L x = b</span></div>
<div class="line"><a name="l00241"></a><span class="lineno">  241</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;L.size1(); ++i)</div>
<div class="line"><a name="l00242"></a><span class="lineno">  242</span>&#160;  {</div>
<div class="line"><a name="l00243"></a><span class="lineno">  243</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> j=0; j&lt;i; ++j)</div>
<div class="line"><a name="l00244"></a><span class="lineno">  244</span>&#160;      b[i] -= L(i,j) * b[j];</div>
<div class="line"><a name="l00245"></a><span class="lineno">  245</span>&#160;    b[i] /= L(i,i);</div>
<div class="line"><a name="l00246"></a><span class="lineno">  246</span>&#160;  }</div>
<div class="line"><a name="l00247"></a><span class="lineno">  247</span>&#160;</div>
<div class="line"><a name="l00248"></a><span class="lineno">  248</span>&#160;  <span class="comment">// inplace backward solve L^T x = b:</span></div>
<div class="line"><a name="l00249"></a><span class="lineno">  249</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=L.size1()-1;; --i)</div>
<div class="line"><a name="l00250"></a><span class="lineno">  250</span>&#160;  {</div>
<div class="line"><a name="l00251"></a><span class="lineno">  251</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> k=i+1; k&lt;L.size1(); ++k)</div>
<div class="line"><a name="l00252"></a><span class="lineno">  252</span>&#160;      b[i] -= L(k,i) * b[k];</div>
<div class="line"><a name="l00253"></a><span class="lineno">  253</span>&#160;    b[i] /= L(i,i);</div>
<div class="line"><a name="l00254"></a><span class="lineno">  254</span>&#160;</div>
<div class="line"><a name="l00255"></a><span class="lineno">  255</span>&#160;    <span class="keywordflow">if</span> (i==0) <span class="comment">//vcl_size_t might be unsigned, therefore manual check for equality with zero here</span></div>
<div class="line"><a name="l00256"></a><span class="lineno">  256</span>&#160;      <span class="keywordflow">break</span>;</div>
<div class="line"><a name="l00257"></a><span class="lineno">  257</span>&#160;  }</div>
<div class="line"><a name="l00258"></a><span class="lineno">  258</span>&#160;}</div>
<div class="line"><a name="l00259"></a><span class="lineno">  259</span>&#160;</div>
<div class="line"><a name="l00260"></a><span class="lineno">  260</span>&#160;</div>
<div class="line"><a name="l00261"></a><span class="lineno">  261</span>&#160;</div>
<div class="line"><a name="l00262"></a><span class="lineno">  262</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00263"></a><span class="lineno">  263</span>&#160;<span class="comment">// Compute the Cholesky factor L from the sparse vectors y_k</span></div>
<div class="line"><a name="l00264"></a><span class="lineno">  264</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00265"></a><span class="lineno">  265</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> MatrixT, <span class="keyword">typename</span> VectorT&gt;</div>
<div class="line"><a name="l00266"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#aeac5736cf32d6afbea570aa683dbe115">  266</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#aeac5736cf32d6afbea570aa683dbe115">computeL</a>(MatrixT <span class="keyword">const</span> &amp; A,</div>
<div class="line"><a name="l00267"></a><span class="lineno">  267</span>&#160;              MatrixT       &amp; L,</div>
<div class="line"><a name="l00268"></a><span class="lineno">  268</span>&#160;              MatrixT       &amp; L_trans,</div>
<div class="line"><a name="l00269"></a><span class="lineno">  269</span>&#160;              std::vector&lt;VectorT&gt; &amp; Y,</div>
<div class="line"><a name="l00270"></a><span class="lineno">  270</span>&#160;              std::vector&lt;std::vector&lt;vcl_size_t&gt; &gt; &amp; J)</div>
<div class="line"><a name="l00271"></a><span class="lineno">  271</span>&#160;{</div>
<div class="line"><a name="l00272"></a><span class="lineno">  272</span>&#160;  <span class="keyword">typedef</span> <span class="keyword">typename</span> VectorT::value_type                          NumericType;</div>
<div class="line"><a name="l00273"></a><span class="lineno">  273</span>&#160;  <span class="keyword">typedef</span> std::vector&lt;std::map&lt;unsigned int, NumericType&gt; &gt;     STLSparseMatrixType;</div>
<div class="line"><a name="l00274"></a><span class="lineno">  274</span>&#160;</div>
<div class="line"><a name="l00275"></a><span class="lineno">  275</span>&#160;  STLSparseMatrixType L_temp(A.size1());</div>
<div class="line"><a name="l00276"></a><span class="lineno">  276</span>&#160;</div>
<div class="line"><a name="l00277"></a><span class="lineno">  277</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> k=0; k&lt;A.size1(); ++k)</div>
<div class="line"><a name="l00278"></a><span class="lineno">  278</span>&#160;  {</div>
<div class="line"><a name="l00279"></a><span class="lineno">  279</span>&#160;    std::vector&lt;vcl_size_t&gt; <span class="keyword">const</span> &amp; Jk = J[k];</div>
<div class="line"><a name="l00280"></a><span class="lineno">  280</span>&#160;    VectorT <span class="keyword">const</span> &amp; yk = Y[k];</div>
<div class="line"><a name="l00281"></a><span class="lineno">  281</span>&#160;</div>
<div class="line"><a name="l00282"></a><span class="lineno">  282</span>&#160;    <span class="comment">//compute L(k,k):</span></div>
<div class="line"><a name="l00283"></a><span class="lineno">  283</span>&#160;    NumericType Lkk = A(k,k);</div>
<div class="line"><a name="l00284"></a><span class="lineno">  284</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;Jk.size(); ++i)</div>
<div class="line"><a name="l00285"></a><span class="lineno">  285</span>&#160;      Lkk -= A(Jk[i],k) * yk[i];</div>
<div class="line"><a name="l00286"></a><span class="lineno">  286</span>&#160;</div>
<div class="line"><a name="l00287"></a><span class="lineno">  287</span>&#160;    Lkk = NumericType(1) / std::sqrt(Lkk);</div>
<div class="line"><a name="l00288"></a><span class="lineno">  288</span>&#160;    L_temp[k][<span class="keyword">static_cast&lt;</span><span class="keywordtype">unsigned</span> <span class="keywordtype">int</span><span class="keyword">&gt;</span>(k)] = Lkk;</div>
<div class="line"><a name="l00289"></a><span class="lineno">  289</span>&#160;    L_trans(k,k) = Lkk;</div>
<div class="line"><a name="l00290"></a><span class="lineno">  290</span>&#160;</div>
<div class="line"><a name="l00291"></a><span class="lineno">  291</span>&#160;    <span class="comment">//write lower diagonal entries:</span></div>
<div class="line"><a name="l00292"></a><span class="lineno">  292</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;Jk.size(); ++i)</div>
<div class="line"><a name="l00293"></a><span class="lineno">  293</span>&#160;    {</div>
<div class="line"><a name="l00294"></a><span class="lineno">  294</span>&#160;      L_temp[Jk[i]][<span class="keyword">static_cast&lt;</span><span class="keywordtype">unsigned</span> <span class="keywordtype">int</span><span class="keyword">&gt;</span>(k)] = -Lkk * yk[i];</div>
<div class="line"><a name="l00295"></a><span class="lineno">  295</span>&#160;      L_trans(k, Jk[i]) = -Lkk * yk[i];</div>
<div class="line"><a name="l00296"></a><span class="lineno">  296</span>&#160;    }</div>
<div class="line"><a name="l00297"></a><span class="lineno">  297</span>&#160;  } <span class="comment">//for k</span></div>
<div class="line"><a name="l00298"></a><span class="lineno">  298</span>&#160;</div>
<div class="line"><a name="l00299"></a><span class="lineno">  299</span>&#160;</div>
<div class="line"><a name="l00300"></a><span class="lineno">  300</span>&#160;  <span class="comment">//build L from L_temp</span></div>
<div class="line"><a name="l00301"></a><span class="lineno">  301</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;L_temp.size(); ++i)</div>
<div class="line"><a name="l00302"></a><span class="lineno">  302</span>&#160;    <span class="keywordflow">for</span> (<span class="keyword">typename</span> std::map&lt;unsigned int, NumericType&gt;::const_iterator it = L_temp[i].begin();</div>
<div class="line"><a name="l00303"></a><span class="lineno">  303</span>&#160;           it != L_temp[i].end();</div>
<div class="line"><a name="l00304"></a><span class="lineno">  304</span>&#160;         ++it)</div>
<div class="line"><a name="l00305"></a><span class="lineno">  305</span>&#160;      L(i, it-&gt;first) = it-&gt;second;</div>
<div class="line"><a name="l00306"></a><span class="lineno">  306</span>&#160;}</div>
<div class="line"><a name="l00307"></a><span class="lineno">  307</span>&#160;</div>
<div class="line"><a name="l00308"></a><span class="lineno">  308</span>&#160;</div>
<div class="line"><a name="l00309"></a><span class="lineno">  309</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00310"></a><span class="lineno">  310</span>&#160;<span class="comment">// Top level FSPAI function</span></div>
<div class="line"><a name="l00311"></a><span class="lineno">  311</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00312"></a><span class="lineno">  312</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> MatrixT&gt;</div>
<div class="line"><a name="l00313"></a><span class="lineno"><a class="line" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a23b282bb53b72b43e7f76d9aeb3df64b">  313</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a23b282bb53b72b43e7f76d9aeb3df64b">computeFSPAI</a>(MatrixT <span class="keyword">const</span> &amp; A,</div>
<div class="line"><a name="l00314"></a><span class="lineno">  314</span>&#160;                  MatrixT <span class="keyword">const</span> &amp; PatternA,</div>
<div class="line"><a name="l00315"></a><span class="lineno">  315</span>&#160;                  MatrixT       &amp; L,</div>
<div class="line"><a name="l00316"></a><span class="lineno">  316</span>&#160;                  MatrixT       &amp; L_trans,</div>
<div class="line"><a name="l00317"></a><span class="lineno">  317</span>&#160;                  <a class="code" href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html">fspai_tag</a>)</div>
<div class="line"><a name="l00318"></a><span class="lineno">  318</span>&#160;{</div>
<div class="line"><a name="l00319"></a><span class="lineno">  319</span>&#160;  <span class="keyword">typedef</span> <span class="keyword">typename</span> MatrixT::value_type                    <a class="code" href="tests_2src_2bisect_8cpp.html#a52b5d30a2d7b064678644a3bf49b7f6c">NumericT</a>;</div>
<div class="line"><a name="l00320"></a><span class="lineno">  320</span>&#160;  <span class="keyword">typedef</span> boost::numeric::ublas::matrix&lt;NumericT&gt;         DenseMatrixType;</div>
<div class="line"><a name="l00321"></a><span class="lineno">  321</span>&#160;  <span class="keyword">typedef</span> std::vector&lt;std::map&lt;unsigned int, NumericT&gt; &gt;  SparseMatrixType;</div>
<div class="line"><a name="l00322"></a><span class="lineno">  322</span>&#160;</div>
<div class="line"><a name="l00323"></a><span class="lineno">  323</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00324"></a><span class="lineno">  324</span>&#160;  <span class="comment">// preprocessing: Store A in a STL container:</span></div>
<div class="line"><a name="l00325"></a><span class="lineno">  325</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00326"></a><span class="lineno">  326</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;Transferring to STL container:&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00327"></a><span class="lineno">  327</span>&#160;  std::vector&lt;std::vector&lt;NumericT&gt; &gt;    y_k(A.size1());</div>
<div class="line"><a name="l00328"></a><span class="lineno">  328</span>&#160;  SparseMatrixType   STL_A(A.size1());</div>
<div class="line"><a name="l00329"></a><span class="lineno">  329</span>&#160;  <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#af1ff03eb8bd6bd2f78f4738731394f7d">sym_sparse_matrix_to_stl</a>(A, STL_A);</div>
<div class="line"><a name="l00330"></a><span class="lineno">  330</span>&#160;</div>
<div class="line"><a name="l00331"></a><span class="lineno">  331</span>&#160;</div>
<div class="line"><a name="l00332"></a><span class="lineno">  332</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00333"></a><span class="lineno">  333</span>&#160;  <span class="comment">// Step 1: Generate pattern indices</span></div>
<div class="line"><a name="l00334"></a><span class="lineno">  334</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00335"></a><span class="lineno">  335</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;computeFSPAI(): Generating pattern...&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00336"></a><span class="lineno">  336</span>&#160;  std::vector&lt;std::vector&lt;vcl_size_t&gt; &gt; J(A.size1());</div>
<div class="line"><a name="l00337"></a><span class="lineno">  337</span>&#160;  <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ae5f2c2a17a35ffa9682589bc3bd692dc">generateJ</a>(PatternA, J);</div>
<div class="line"><a name="l00338"></a><span class="lineno">  338</span>&#160;</div>
<div class="line"><a name="l00339"></a><span class="lineno">  339</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00340"></a><span class="lineno">  340</span>&#160;  <span class="comment">// Step 2: Set up matrix blocks</span></div>
<div class="line"><a name="l00341"></a><span class="lineno">  341</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00342"></a><span class="lineno">  342</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;computeFSPAI(): Setting up matrix blocks...&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00343"></a><span class="lineno">  343</span>&#160;  std::vector&lt;DenseMatrixType&gt;  subblocks_A(A.size1());</div>
<div class="line"><a name="l00344"></a><span class="lineno">  344</span>&#160;  <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#acd198c046af39cfe38f1aad62c0580ae">fill_blocks</a>(STL_A, subblocks_A, J, y_k);</div>
<div class="line"><a name="l00345"></a><span class="lineno">  345</span>&#160;  STL_A.clear(); <span class="comment">//not needed anymore</span></div>
<div class="line"><a name="l00346"></a><span class="lineno">  346</span>&#160;</div>
<div class="line"><a name="l00347"></a><span class="lineno">  347</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00348"></a><span class="lineno">  348</span>&#160;  <span class="comment">// Step 3: Cholesky-factor blocks</span></div>
<div class="line"><a name="l00349"></a><span class="lineno">  349</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00350"></a><span class="lineno">  350</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;computeFSPAI(): Cholesky-factorization...&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00351"></a><span class="lineno">  351</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;subblocks_A.size(); ++i)</div>
<div class="line"><a name="l00352"></a><span class="lineno">  352</span>&#160;  {</div>
<div class="line"><a name="l00353"></a><span class="lineno">  353</span>&#160;    <span class="comment">//std::cout &lt;&lt; &quot;Block before: &quot; &lt;&lt; subblocks_A[i] &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00354"></a><span class="lineno">  354</span>&#160;    <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ac3aaf276d63d5442f2f95d060912c4ab">cholesky_decompose</a>(subblocks_A[i]);</div>
<div class="line"><a name="l00355"></a><span class="lineno">  355</span>&#160;    <span class="comment">//std::cout &lt;&lt; &quot;Block after: &quot; &lt;&lt; subblocks_A[i] &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00356"></a><span class="lineno">  356</span>&#160;  }</div>
<div class="line"><a name="l00357"></a><span class="lineno">  357</span>&#160;</div>
<div class="line"><a name="l00358"></a><span class="lineno">  358</span>&#160;</div>
<div class="line"><a name="l00359"></a><span class="lineno">  359</span>&#160;  <span class="comment">/*vcl_size_t num_bytes = 0;</span></div>
<div class="line"><a name="l00360"></a><span class="lineno">  360</span>&#160;<span class="comment">  for (vcl_size_t i=0; i&lt;subblocks_A.size(); ++i)</span></div>
<div class="line"><a name="l00361"></a><span class="lineno">  361</span>&#160;<span class="comment">    num_bytes += 8*subblocks_A[i].size1()*subblocks_A[i].size2();*/</span></div>
<div class="line"><a name="l00362"></a><span class="lineno">  362</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;Memory for FSPAI matrix: &quot; &lt;&lt; num_bytes / (1024.0 * 1024.0) &lt;&lt; &quot; MB&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00363"></a><span class="lineno">  363</span>&#160;</div>
<div class="line"><a name="l00364"></a><span class="lineno">  364</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00365"></a><span class="lineno">  365</span>&#160;  <span class="comment">// Step 4: Solve for y_k</span></div>
<div class="line"><a name="l00366"></a><span class="lineno">  366</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00367"></a><span class="lineno">  367</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;computeFSPAI(): Cholesky-solve...&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00368"></a><span class="lineno">  368</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">vcl_size_t</a> i=0; i&lt;y_k.size(); ++i)</div>
<div class="line"><a name="l00369"></a><span class="lineno">  369</span>&#160;  {</div>
<div class="line"><a name="l00370"></a><span class="lineno">  370</span>&#160;    <span class="keywordflow">if</span> (subblocks_A[i].<a class="code" href="namespaceviennacl_1_1traits.html#aa756f5d6820722094cae0d8b9bb6d5e2">size1</a>() &gt; 0) <span class="comment">//block might be empty...</span></div>
<div class="line"><a name="l00371"></a><span class="lineno">  371</span>&#160;    {</div>
<div class="line"><a name="l00372"></a><span class="lineno">  372</span>&#160;      <span class="comment">//y_k[i].resize(subblocks_A[i].size1());</span></div>
<div class="line"><a name="l00373"></a><span class="lineno">  373</span>&#160;      <span class="comment">//std::cout &lt;&lt; &quot;y_k[&quot; &lt;&lt; i &lt;&lt; &quot;]: &quot;;</span></div>
<div class="line"><a name="l00374"></a><span class="lineno">  374</span>&#160;      <span class="comment">//for (vcl_size_t j=0; j&lt;y_k[i].size(); ++j)</span></div>
<div class="line"><a name="l00375"></a><span class="lineno">  375</span>&#160;      <span class="comment">//  std::cout &lt;&lt; y_k[i][j] &lt;&lt; &quot; &quot;;</span></div>
<div class="line"><a name="l00376"></a><span class="lineno">  376</span>&#160;      <span class="comment">//std::cout &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00377"></a><span class="lineno">  377</span>&#160;      <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a097e316b51cf3854abec362e6a6d1d47">cholesky_solve</a>(subblocks_A[i], y_k[i]);</div>
<div class="line"><a name="l00378"></a><span class="lineno">  378</span>&#160;    }</div>
<div class="line"><a name="l00379"></a><span class="lineno">  379</span>&#160;  }</div>
<div class="line"><a name="l00380"></a><span class="lineno">  380</span>&#160;</div>
<div class="line"><a name="l00381"></a><span class="lineno">  381</span>&#160;</div>
<div class="line"><a name="l00382"></a><span class="lineno">  382</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00383"></a><span class="lineno">  383</span>&#160;  <span class="comment">// Step 5: Set up Cholesky factors L and L_trans</span></div>
<div class="line"><a name="l00384"></a><span class="lineno">  384</span>&#160;  <span class="comment">//</span></div>
<div class="line"><a name="l00385"></a><span class="lineno">  385</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;computeFSPAI(): Computing L...&quot; &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00386"></a><span class="lineno">  386</span>&#160;  L.resize(A.size1(), A.size2(), <span class="keyword">false</span>);</div>
<div class="line"><a name="l00387"></a><span class="lineno">  387</span>&#160;  L.reserve(A.nnz(), <span class="keyword">false</span>);</div>
<div class="line"><a name="l00388"></a><span class="lineno">  388</span>&#160;  L_trans.resize(A.size1(), A.size2(), <span class="keyword">false</span>);</div>
<div class="line"><a name="l00389"></a><span class="lineno">  389</span>&#160;  L_trans.reserve(A.nnz(), <span class="keyword">false</span>);</div>
<div class="line"><a name="l00390"></a><span class="lineno">  390</span>&#160;  <a class="code" href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#aeac5736cf32d6afbea570aa683dbe115">computeL</a>(A, L, L_trans, y_k, J);</div>
<div class="line"><a name="l00391"></a><span class="lineno">  391</span>&#160;</div>
<div class="line"><a name="l00392"></a><span class="lineno">  392</span>&#160;  <span class="comment">//std::cout &lt;&lt; &quot;L: &quot; &lt;&lt; L &lt;&lt; std::endl;</span></div>
<div class="line"><a name="l00393"></a><span class="lineno">  393</span>&#160;}</div>
<div class="line"><a name="l00394"></a><span class="lineno">  394</span>&#160;</div>
<div class="line"><a name="l00395"></a><span class="lineno">  395</span>&#160;</div>
<div class="line"><a name="l00396"></a><span class="lineno">  396</span>&#160;</div>
<div class="line"><a name="l00397"></a><span class="lineno">  397</span>&#160;}</div>
<div class="line"><a name="l00398"></a><span class="lineno">  398</span>&#160;}</div>
<div class="line"><a name="l00399"></a><span class="lineno">  399</span>&#160;}</div>
<div class="line"><a name="l00400"></a><span class="lineno">  400</span>&#160;}</div>
<div class="line"><a name="l00401"></a><span class="lineno">  401</span>&#160;</div>
<div class="line"><a name="l00402"></a><span class="lineno">  402</span>&#160;<span class="preprocessor">#endif</span></div>
<div class="ttc" id="matrix__operations_8hpp_html"><div class="ttname"><a href="matrix__operations_8hpp.html">matrix_operations.hpp</a></div><div class="ttdoc">Implementations of dense matrix related operations including matrix-vector products. </div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_ac3aaf276d63d5442f2f95d060912c4ab"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ac3aaf276d63d5442f2f95d060912c4ab">viennacl::linalg::detail::spai::cholesky_decompose</a></div><div class="ttdeci">void cholesky_decompose(MatrixT &amp;A)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00210">fspai.hpp:210</a></div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_af1ff03eb8bd6bd2f78f4738731394f7d"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#af1ff03eb8bd6bd2f78f4738731394f7d">viennacl::linalg::detail::spai::sym_sparse_matrix_to_stl</a></div><div class="ttdeci">void sym_sparse_matrix_to_stl(MatrixT const &amp;A, std::vector&lt; std::map&lt; unsigned int, NumericT &gt; &gt; &amp;STL_A)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00121">fspai.hpp:121</a></div></div>
<div class="ttc" id="prod_8hpp_html"><div class="ttname"><a href="prod_8hpp.html">prod.hpp</a></div><div class="ttdoc">Generic interface for matrix-vector and matrix-matrix products. See viennacl/linalg/vector_operations...</div></div>
<div class="ttc" id="matrix_8hpp_html"><div class="ttname"><a href="matrix_8hpp.html">matrix.hpp</a></div><div class="ttdoc">Implementation of the dense matrix class. </div></div>
<div class="ttc" id="namespaceviennacl_1_1traits_html_aa756f5d6820722094cae0d8b9bb6d5e2"><div class="ttname"><a href="namespaceviennacl_1_1traits.html#aa756f5d6820722094cae0d8b9bb6d5e2">viennacl::traits::size1</a></div><div class="ttdeci">vcl_size_t size1(MatrixType const &amp;mat)</div><div class="ttdoc">Generic routine for obtaining the number of rows of a matrix (ViennaCL, uBLAS, etc.) </div><div class="ttdef"><b>Definition:</b> <a href="size_8hpp_source.html#l00163">size.hpp:163</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_abc6969227f20fe566a6facb9c4c6c92a"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#abc6969227f20fe566a6facb9c4c6c92a">viennacl::linalg::detail::spai::fspai_tag::getIsRight</a></div><div class="ttdeci">bool getIsRight() const </div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00094">fspai.hpp:94</a></div></div>
<div class="ttc" id="inner__prod_8hpp_html"><div class="ttname"><a href="inner__prod_8hpp.html">inner_prod.hpp</a></div><div class="ttdoc">Generic interface for the computation of inner products. See viennacl/linalg/vector_operations.hpp for implementations. </div></div>
<div class="ttc" id="tests_2src_2bisect_8cpp_html_a52b5d30a2d7b064678644a3bf49b7f6c"><div class="ttname"><a href="tests_2src_2bisect_8cpp.html#a52b5d30a2d7b064678644a3bf49b7f6c">NumericT</a></div><div class="ttdeci">float NumericT</div><div class="ttdef"><b>Definition:</b> <a href="tests_2src_2bisect_8cpp_source.html#l00040">bisect.cpp:40</a></div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_a097e316b51cf3854abec362e6a6d1d47"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a097e316b51cf3854abec362e6a6d1d47">viennacl::linalg::detail::spai::cholesky_solve</a></div><div class="ttdeci">void cholesky_solve(MatrixT const &amp;L, VectorT &amp;b)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00238">fspai.hpp:238</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html">viennacl::linalg::detail::spai::fspai_tag</a></div><div class="ttdoc">A tag for FSPAI. Experimental. </div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00071">fspai.hpp:71</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_a3a77ab82209b48986e7259e0caf0d15b"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a3a77ab82209b48986e7259e0caf0d15b">viennacl::linalg::detail::spai::fspai_tag::setIterationLimit</a></div><div class="ttdeci">void setIterationLimit(unsigned long iteration_limit)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00100">fspai.hpp:100</a></div></div>
<div class="ttc" id="ilu_8hpp_html"><div class="ttname"><a href="ilu_8hpp.html">ilu.hpp</a></div><div class="ttdoc">Implementations of incomplete factorization preconditioners. Convenience header file. </div></div>
<div class="ttc" id="compressed__matrix_8hpp_html"><div class="ttname"><a href="compressed__matrix_8hpp.html">compressed_matrix.hpp</a></div><div class="ttdoc">Implementation of the compressed_matrix class. </div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_a343d50ea020c9858992c2b9998de029d"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a343d50ea020c9858992c2b9998de029d">viennacl::linalg::detail::spai::fspai_tag::getResidualNormThreshold</a></div><div class="ttdeci">double getResidualNormThreshold() const </div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00091">fspai.hpp:91</a></div></div>
<div class="ttc" id="sparse__matrix__operations_8hpp_html"><div class="ttname"><a href="sparse__matrix__operations_8hpp.html">sparse_matrix_operations.hpp</a></div><div class="ttdoc">Implementations of operations using sparse matrices. </div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_adac97317085425dccccd17b1101b48b5"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#adac97317085425dccccd17b1101b48b5">viennacl::linalg::detail::spai::fspai_tag::getIterationLimit</a></div><div class="ttdeci">unsigned long getIterationLimit() const </div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00092">fspai.hpp:92</a></div></div>
<div class="ttc" id="namespaceviennacl_html_a98a0afcc513111ffa0bd138f891930df"><div class="ttname"><a href="namespaceviennacl.html#a98a0afcc513111ffa0bd138f891930df">viennacl::vcl_size_t</a></div><div class="ttdeci">std::size_t vcl_size_t</div><div class="ttdef"><b>Definition:</b> <a href="forwards_8h_source.html#l00075">forwards.h:75</a></div></div>
<div class="ttc" id="cg_8hpp_html"><div class="ttname"><a href="cg_8hpp.html">cg.hpp</a></div><div class="ttdoc">The conjugate gradient method is implemented here. </div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_aeac5736cf32d6afbea570aa683dbe115"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#aeac5736cf32d6afbea570aa683dbe115">viennacl::linalg::detail::spai::computeL</a></div><div class="ttdeci">void computeL(MatrixT const &amp;A, MatrixT &amp;L, MatrixT &amp;L_trans, std::vector&lt; VectorT &gt; &amp;Y, std::vector&lt; std::vector&lt; vcl_size_t &gt; &gt; &amp;J)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00266">fspai.hpp:266</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_a168c2ef94e9bb8b5e110a4b50102c32e"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a168c2ef94e9bb8b5e110a4b50102c32e">viennacl::linalg::detail::spai::fspai_tag::setIsStatic</a></div><div class="ttdeci">void setIsStatic(bool is_static)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00106">fspai.hpp:106</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_ac6a4e2817d41685c01dbd3288fa2040b"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#ac6a4e2817d41685c01dbd3288fa2040b">viennacl::linalg::detail::spai::fspai_tag::getIsStatic</a></div><div class="ttdeci">bool getIsStatic() const </div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00093">fspai.hpp:93</a></div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_ae5f2c2a17a35ffa9682589bc3bd692dc"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#ae5f2c2a17a35ffa9682589bc3bd692dc">viennacl::linalg::detail::spai::generateJ</a></div><div class="ttdeci">void generateJ(MatrixT const &amp;A, std::vector&lt; std::vector&lt; vcl_size_t &gt; &gt; &amp;J)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00145">fspai.hpp:145</a></div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_a23b282bb53b72b43e7f76d9aeb3df64b"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#a23b282bb53b72b43e7f76d9aeb3df64b">viennacl::linalg::detail::spai::computeFSPAI</a></div><div class="ttdeci">void computeFSPAI(MatrixT const &amp;A, MatrixT const &amp;PatternA, MatrixT &amp;L, MatrixT &amp;L_trans, fspai_tag)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00313">fspai.hpp:313</a></div></div>
<div class="ttc" id="namespaceviennacl_1_1linalg_1_1detail_1_1spai_html_acd198c046af39cfe38f1aad62c0580ae"><div class="ttname"><a href="namespaceviennacl_1_1linalg_1_1detail_1_1spai.html#acd198c046af39cfe38f1aad62c0580ae">viennacl::linalg::detail::spai::fill_blocks</a></div><div class="ttdeci">void fill_blocks(std::vector&lt; std::map&lt; unsigned int, NumericT &gt; &gt; &amp;A, std::vector&lt; MatrixT &gt; &amp;blocks, std::vector&lt; std::vector&lt; vcl_size_t &gt; &gt; const &amp;J, std::vector&lt; VectorT &gt; &amp;Y)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00172">fspai.hpp:172</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_a9e946a528617beee32177ec12ba13a75"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a9e946a528617beee32177ec12ba13a75">viennacl::linalg::detail::spai::fspai_tag::setIsRight</a></div><div class="ttdeci">void setIsRight(bool is_right)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00105">fspai.hpp:105</a></div></div>
<div class="ttc" id="scalar_8hpp_html"><div class="ttname"><a href="scalar_8hpp.html">scalar.hpp</a></div><div class="ttdoc">Implementation of the ViennaCL scalar class. </div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_a71bd4d8f9e2b2530c4ac0aa9f220fb4d"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a71bd4d8f9e2b2530c4ac0aa9f220fb4d">viennacl::linalg::detail::spai::fspai_tag::fspai_tag</a></div><div class="ttdeci">fspai_tag(double residual_norm_threshold=1e-3, unsigned int iteration_limit=5, bool is_static=false, bool is_right=false)</div><div class="ttdoc">Constructor. </div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00081">fspai.hpp:81</a></div></div>
<div class="ttc" id="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag_html_a5527a30c629f794f13da007a4aee9270"><div class="ttname"><a href="classviennacl_1_1linalg_1_1detail_1_1spai_1_1fspai__tag.html#a5527a30c629f794f13da007a4aee9270">viennacl::linalg::detail::spai::fspai_tag::setResidualNormThreshold</a></div><div class="ttdeci">void setResidualNormThreshold(double residual_norm_threshold)</div><div class="ttdef"><b>Definition:</b> <a href="fspai_8hpp_source.html#l00095">fspai.hpp:95</a></div></div>
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