File: VirtuosoRepository.java

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/*
 *  $Id$
 *
 *  This file is part of the OpenLink Software Virtuoso Open-Source (VOS)
 *  project.
 *
 *  Copyright (C) 1998-2018 OpenLink Software
 *
 *  This project is free software; you can redistribute it and/or modify it
 *  under the terms of the GNU General Public License as published by the
 *  Free Software Foundation; only version 2 of the License, dated June 1991.
 *
 *  This program is distributed in the hope that it will be useful, but
 *  WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 *  General Public License for more details.
 *
 *  You should have received a copy of the GNU General Public License along
 *  with this program; if not, write to the Free Software Foundation, Inc.,
 *  51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 *
 */
package virtuoso.rdf4j.driver;

import org.eclipse.rdf4j.model.ValueFactory;
import org.eclipse.rdf4j.model.impl.SimpleValueFactory;
import org.eclipse.rdf4j.repository.Repository;
import org.eclipse.rdf4j.repository.RepositoryConnection;
import org.eclipse.rdf4j.repository.RepositoryException;
import virtuoso.jdbc4.VirtuosoConnectionPoolDataSource;

import javax.sql.ConnectionPoolDataSource;
import javax.sql.DataSource;
import javax.sql.XADataSource;
import java.io.File;
import java.sql.DriverManager;

/**
 * A Sesame repository that contains RDF data that can be queried and updated.
 * Access to the repository can be acquired by openening a connection to it.
 * This connection can then be used to query and/or update the contents of the
 * repository. Depending on the implementation of the repository, it may or may
 * not support multiple concurrent connections.
 * <p>
 * Please note that a repository needs to be initialized before it can be used
 * and that it should be shut down before it is discarded/garbage collected.
 * Forgetting the latter can result in loss of data (depending on the Repository
 * implementation)!
 *
 */
public class VirtuosoRepository implements Repository {

    public static final int CONCUR_DEFAULT = 0;
    public static final int CONCUR_PESSIMISTIC = 1;
    public static final int CONCUR_OPTIMISTIC = 2;

    ValueFactory valueFactory = SimpleValueFactory.getInstance();
    File dataDir;

    private VirtuosoConnectionPoolDataSource pds = new VirtuosoConnectionPoolDataSource();
    private String url_hostlist;
    private String user;
    private String password;
    private int resultsHandlerType = 0;
    private boolean roundrobin;
    private String charset = "UTF-8";
    static final String utf8 = "charset=utf-8";
    private boolean initialized = false;

    private DataSource _ds;
    private ConnectionPoolDataSource _pds;
    private XADataSource _xads;

    boolean useLazyAdd = true;
    boolean insertBNodeAsVirtuosoIRI = false;
    boolean insertStringLiteralAsSimple = false;
    String defGraph;
    int prefetchSize = 100;
    int batchSize = 5000;
    int queryTimeout = 0;
    String ruleSet;
    String macroLib;
    int concurencyMode = CONCUR_DEFAULT;
    boolean useDefGraphForQueries = false;


    public VirtuosoRepository(ConnectionPoolDataSource ds, String defGraph, boolean useLazyAdd) {
        super();
        this.defGraph = defGraph;
        this.useLazyAdd = useLazyAdd;
        this._pds = ds;
    }

    public VirtuosoRepository(DataSource ds, String defGraph, boolean useLazyAdd) {
        super();
        this.defGraph = defGraph;
        this.useLazyAdd = useLazyAdd;
        this._ds = ds;
    }

    public VirtuosoRepository(XADataSource ds, String defGraph) {
        super();
        this.defGraph = defGraph;
        this.useLazyAdd = false;
        this._xads = ds;
    }

    /**
     * Construct a VirtuosoRepository with a specified parameters
     *
     * @param url_hostlist
     *        the Virtuoso JDBC URL connection string or hostlist for poolled connection.
     *        Virtuoso database hostlist
     *        <pre>
     *        "hostone:1112,hosttwo:1113"
     *     or "hostone,hosttwo" if default port=1111 is used on hosts
     *        </pre>
     * @param user
     *        the database user on whose behalf the connection is being made
     * @param password
     *        the user's password
     * @param defGraph
     *        a default Graph name, used for Sesame calls, when contexts list
     *        is empty, exclude <tt>exportStatements, hasStatement, getStatements</tt> methods
     * @param useLazyAdd
     *        set <tt>true</tt>  to enable using batch optimization for sequence of
     *        <pre>
     *	  add(Resource subject, URI predicate, Value object, Resource... contexts);
     *        add(Statement statement, Resource... contexts);
     *        </pre>
     *        methods, when autoCommit mode is off. The triples will be sent to DBMS on commit call
     *        or when batch size become more than predefined batch max_size.
     *        LazyAdd will be set false for XADataSource connection
     *
     */
    public VirtuosoRepository(String url_hostlist, String user, String password, String defGraph, boolean useLazyAdd) {
        super();
        this.url_hostlist = url_hostlist.trim();
        this.user = user;
        this.password = password;
        this.defGraph = defGraph;
        this.useLazyAdd = useLazyAdd;
    }

    /**
     * Construct a VirtuosoRepository with a specified parameters
     * <tt>defGraph</tt> will be set to <tt>"sesame:nil"</tt>.
     *
     * @param url_hostlist
     *        the Virtuoso JDBC URL connection string or hostlist for poolled connection.
     *        Virtuoso database hostlist
     *        <pre>
     *        "hostone:1112,hosttwo:1113"
     *     or "hostone,hosttwo" if default port=1111 is used on hosts
     *        </pre>
     * @param user
     *        the database user on whose behalf the connection is being made
     * @param password
     *        the user's password
     * @param useLazyAdd
     *        set <tt>true</tt>  to enable using batch optimization for sequence of
     *        <pre>
     *	  add(Resource subject, URI predicate, Value object, Resource... contexts);
     *        add(Statement statement, Resource... contexts);
     *        </pre>
     *        methods, when autoCommit mode is off. The triples will be sent to DBMS on commit call
     *        or when batch size become more than predefined batch max_size.
     *        LazyAdd will be set false for XADataSource connection
     *
     */
    public VirtuosoRepository(String url_hostlist, String user, String password, boolean useLazyAdd) {
        this(url_hostlist, user, password, "sesame:nil", useLazyAdd);
    }

    /**
     * Construct a VirtuosoRepository with a specified parameters.
     * useLazyAdd will be set to <tt>false</tt>.
     *
     * @param url_hostlist
     *        the Virtuoso JDBC URL connection string or hostlist for poolled connection.
     *        Virtuoso database hostlist
     *        <pre>
     *        "hostone:1112,hosttwo:1113"
     *     or "hostone,hosttwo" if the default port=1111 is used for hosts
     *        </pre>
     * @param user
     *        the database user on whose behalf the connection is being made
     * @param password
     *        the user's password
     * @param defGraph
     *        a default Graph name, used for Sesame calls, when contexts list
     *        is empty, exclude <tt>exportStatements, hasStatement, getStatements</tt> methods
     *
     */
    public VirtuosoRepository(String url_hostlist, String user, String password, String defGraph) {
        this(url_hostlist, user, password, defGraph, true);
    }

    /**
     * Construct a VirtuosoRepository with a specified parameters.
     * <tt>useLazyAdd</tt> will be set to <tt>false</tt>.
     * <tt>defGraph</tt> will be set to <tt>"sesame:nil"</tt>.
     *
     * @param url_hostlist
     *        the Virtuoso JDBC URL connection string or hostlist for poolled connection.
     *        Virtuoso database hostlist
     *        <pre>
     *        "hostone:1112,hosttwo:1113"
     *     or "hostone,hosttwo" if the default port=1111 is used for hosts
     *        </pre>
     * @param user
     *        the database user on whose behalf the connection is being made
     * @param password
     *        the user's password
     */
    public VirtuosoRepository(String url_hostlist, String user, String password) {
        this(url_hostlist, user, password, true);
    }

    /**
     * Opens a connection to this repository that can be used for querying and
     * updating the contents of the repository. Created connections need to be
     * closed to make sure that any resources they keep hold of are released. The
     * best way to do this is to use a try-finally-block as follows:
     *
     * <pre>
     * Connection con = repository.getConnection();
     * try {
     * 	// perform operations on the connection
     * }
     * finally {
     * 	con.close();
     * }
     * </pre>
     *
     * @return A connection that allows operations on this repository.
     * @throws RepositoryException
     *         If something went wrong during the creation of the Connection.
     */
    public RepositoryConnection getConnection() throws RepositoryException {
        if (_xads != null) {
            try {
                javax.sql.XAConnection xconn = _xads.getXAConnection();
                java.sql.Connection connection = xconn.getConnection();
                this.useLazyAdd = false;
                return new VirtuosoRepositoryConnection(this, connection);
            }
            catch (Exception e) {
                System.out.println("Connection has FAILED.");
                throw new RepositoryException(e);
            }
        }
        else if (_pds != null) {
            try {
                javax.sql.PooledConnection pconn = _pds.getPooledConnection();
                java.sql.Connection connection = pconn.getConnection();
                return new VirtuosoRepositoryConnection(this, connection);
            }
            catch (Exception e) {
                System.out.println("Connection has FAILED.");
                throw new RepositoryException(e);
            }
        }
        else if (_ds != null) {
            try {
                java.sql.Connection connection = _ds.getConnection();
                return new VirtuosoRepositoryConnection(this, connection);
            }
            catch (Exception e) {
                System.out.println("Connection has FAILED.");
                throw new RepositoryException(e);
            }
        }
        else if (url_hostlist.startsWith("jdbc:virtuoso://")) {
            try {
                Class.forName("virtuoso.jdbc4.Driver");
                String url = url_hostlist;
                if (url.toLowerCase().indexOf(utf8) == -1) {
                    if (url.charAt(url.length()-1) != '/')
                        url = url + "/charset=UTF-8";
                    else
                        url = url + "charset=UTF-8";
                }

                if (roundrobin && url.toLowerCase().indexOf("roundrobin=") == -1) {
                    if (url.charAt(url.length()-1) != '/')
                        url = url + "/roundrobin=1";
                    else
                        url = url + "roundrobin=1";
                }

                if (url.toLowerCase().indexOf("log_enable=") == -1) {
                    if (url.charAt(url.length()-1) != '/')
                        url = url + "/log_enable=1";
                    else
                        url = url + "log_enable=1";
                }

                java.sql.Connection connection = DriverManager.getConnection(url, user, password);
                return new VirtuosoRepositoryConnection(this, connection);
            }
            catch (Exception e) {
                System.out.println("Connection to " + url_hostlist + " has FAILED.");
                throw new RepositoryException(e);
            }
        }
        else {
            try {
                pds.setServerName(url_hostlist);
                pds.setUser(user);
                pds.setPassword(password);
                pds.setCharset(charset);
                pds.setRoundrobin(roundrobin);
                javax.sql.PooledConnection pconn = pds.getPooledConnection();
                java.sql.Connection connection = pconn.getConnection();
                return new VirtuosoRepositoryConnection(this, connection);
            }
            catch (Exception e) {
                System.out.println("Connection to " + url_hostlist + " has FAILED.");
                throw new RepositoryException(e);
            }
        }
    }


    /**
     * Set the buffer fetch size(default 100)
     *
     * @param sz
     *        buffer fetch size.
     */
    public void setFetchSize(int sz) {
        this.prefetchSize = sz;
    }

    /**
     * Get the buffer fetch size
     *
     * @return buffer fetch size
     */
    public int getFetchSize() {
        return this.prefetchSize;
    }

    /**
     * Set the batch size for Inserts data(default 5000)
     *
     * @param sz
     *        batch size.
     */
    public void setBatchSize(int sz) {
        this.batchSize = sz;
    }

    /**
     * Get the batch size for Insert data
     *
     * @return batch size for Insert data
     */
    public int getBatchSize() {
        return this.batchSize;
    }

    /**
     * Set the query timeout(default 0)
     *
     * @param seconds
     *        queryTimeout seconds, 0 - unlimited.
     */
    public void setQueryTimeout(int seconds) {
        this.queryTimeout = seconds;
    }

    /**
     * Get the query timeout seconds
     *
     * @return query timeout
     */
    public int getQueryTimeout() {
        return this.queryTimeout;
    }

    /**
     * Set the UseLazyAdd state for connection(default true)
     * for XADataSource connection set false and can't be changed
     * @param v
     *        true - useLazyAdd
     */
    public void setUseLazyAdd(boolean v) {
        this.useLazyAdd = v;
    }

    /**
     * Get the UseLazyAdd state for connection
     *
     * @return useLazyAdd state
     */
    public boolean getUseLazyAdd() {
        return this.useLazyAdd;
    }


    /**
     * Set the RoundRobin state for connection(default false)
     *
     * @param v
     *        true - use roundrobin
     */
    public void setRoundrobin(boolean v) {
        this.roundrobin = v;
    }

    /**
     * Get the RoundRobin state for connection
     *
     * @return roundrobin state
     */
    public boolean getRoundrobin() {
        return this.roundrobin;
    }


    /**
     * Set the insertBNodeAsURI state for connection(default false)
     *
     * @param v
     *        true - insert BNode as Virtuoso IRI
     *        false - insert BNode as Virtuoso Native BNode
     */
    public void setInsertBNodeAsVirtuosoIRI(boolean v) {
        this.insertBNodeAsVirtuosoIRI = v;
    }

    /**
     * Get the insertBNodeAsURI state for connection
     *
     * @return insertBNodeAsURI state
     */
    public boolean getInsertBNodeAsVirtuosoIRI() {
        return this.insertBNodeAsVirtuosoIRI;
    }



    /**
     * Get the insertStringLiteralAsSimple state for connection
     *
     * @return insertStringLiteralAsSimple state
     */
    public boolean getInsertStringLiteralAsSimple() {
        return this.insertStringLiteralAsSimple;
    }

    /**
     * Set the insertStringLiteralAsSimple state for connection(default false) 
     * 
     * @param v
     *        true - insert String Literals as Simple Literals
     *        false - insert String Literals as is
     */
    public void setInsertStringLiteralAsSimple(boolean v) {
        this.insertStringLiteralAsSimple = v;
    }



    /**
     * Set inference RuleSet name
     *
     * @param name
     *        RuleSet name.
     */
    public void setRuleSet(String name) {
        if (name != null && name.equals("null"))
            name = null;
        this.ruleSet = name;
    }

    /**
     * Get the inference RuleSet name
     *
     * @return ruleSet name
     */
    public String getRuleSet() {
        return this.ruleSet;
    }


    /**
     * Set inference MacroLib name
     *
     * @param name
     *        macroLib name.
     */
    public void setMacroLib(String name) {
        if (name != null && name.equals("null"))
            name = null;
        this.macroLib = name;
    }

    /**
     * Get the inference MacroLib name
     *
     * @return macroLib name
     */
    public String getMacroLib() {
        return this.macroLib;
    }

    /**
     * Set the concurrency mode for Insert/Update/Delete operations and SPARUL queries
     *
     * @param mode
     *        Concurrency mode
     */
    public void setConcurrencyMode(int mode) throws RepositoryException
    {
        if (mode != CONCUR_DEFAULT && mode != CONCUR_OPTIMISTIC && mode != CONCUR_PESSIMISTIC)
            throw new IllegalArgumentException("Unsupported concurrency mode: "+mode);

        this.concurencyMode = mode;
    }

    /**
     * Get the concurrency mode for Insert/Update/Delete operations and SPARUL queries
     *
     * @return concurrency mode
     */
    public int getConcurrencyMode() {
        return this.concurencyMode;
    }

    /**
     * Use repository defGraph with SPARQL queries, if query default graph wasn't set (default false) 
     * @param v
     *        true - useDefGraphForQueries
     */
    public void setUseDefGraphForQueries(boolean v) {
	this.useDefGraphForQueries = v;
    }

    /**
     * Get the UseDefGraphForQueries state for connection
     */
    public boolean getUseDefGraphForQueries() {
	return this.useDefGraphForQueries;
    }



    /**
     * Get the directory where data and logging for this repository is stored.
     *
     * @return the directory where data for this repository is stored.
     */
    public File getDataDir() {
        return this.dataDir;
    }

    /**
     * Gets a ValueFactory for this Repository.
     *
     * @return A repository-specific ValueFactory.
     */
    public ValueFactory getValueFactory() {
        return this.valueFactory;
    }

    /**
     * Initializes this repository. A repository needs to be initialized before
     * it can be used.
     *
     * @throws RepositoryException
     *         If the initialization failed.
     */
    public void initialize() throws RepositoryException {
        initialized = true;
    }

    /**
     * Indicates if the Repository has been initialized. Note that the
     * initialization status may change if the Repository is shut down.
     *
     * @return true iff the repository has been initialized.
     */
    public boolean isInitialized() {
        return initialized;
    }


    /**
     * Checks whether this repository is writable, i.e. if the data contained in
     * this repository can be changed. The writability of the repository is
     * determined by the writability of the Sail that this repository operates
     * on.
     */
    public boolean isWritable() throws RepositoryException {
        if (!initialized) {
            throw new IllegalStateException("VirtuosoRepository not initialized.");
        }

        return true; // user login has authenticated this connection
    }

    /**
     * Set the directory where data and logging for this repository is stored.
     *
     * @param dataDir
     *        the directory where data for this repository is stored
     */
    public void setDataDir(File dataDir) {
        this.dataDir = dataDir;
    }

    /**
     * Shuts the repository down, releasing any resources that it keeps hold of.
     * Once shut down, the repository can no longer be used until it is
     * re-initialized.
     */
    public void shutDown() throws RepositoryException {
        initialized = false;
    }

/***
    public int getResultsHandlerType() {
        return resultsHandlerType;
    }

    public void setResultsHandlerType(int handlerType) {
        this.resultsHandlerType = handlerType;
    }
***/

    /**
     * Create ruleSet in DBMS
     *
     * @param ruleSetName
     * @param uriGraphRuleSet
     *
     * @throws RepositoryException
     *         If something went wrong during the creation of the Connection.
     */
    public void createRuleSet(String ruleSetName, String uriGraphRuleSet) throws RepositoryException
    {
        java.sql.Connection con = ((VirtuosoRepositoryConnection)getConnection()).getQuadStoreConnection();

        try {
            java.sql.Statement st = con.createStatement();
            st.execute("rdfs_rule_set('"+ruleSetName+"', '"+uriGraphRuleSet+"')");
            st.close();
        } catch (Exception e) {
            throw new RepositoryException(e);
        }
    }
}