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include /usr/share/dpkg/default.mk
docdir := $(CURDIR)/debian/$(DEB_SOURCE)/usr/share/doc/$(DEB_SOURCE)
ifeq ($(DEB_HOST_GNU_CPU),x86_64)
USEOPT:=yes
else
ifeq ($(DEB_HOST_GNU_CPU),i386)
USEOPT:=yes
else
USEOPT:=no
endif
endif
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
export DEB_LDFLAGS_MAINT_APPEND = -flto
DEB_CXXFLAGS_MAINT_APPEND = -flto
ifneq ($(DEB_HOST_ARCH),ppc64el)
DEB_CXXFLAGS_MAINT_APPEND += -std=c++11
endif
export DEB_CXXFLAGS_MAINT_APPEND
%:
dh $@
override_dh_auto_build:
dh_auto_build
markdown README.md > README.html
sed -i 1d README.html
VDATADIR=/usr/share/vsearch/data
ifeq (,$(findstring nocheck,$(DEB_BUILD_OPTIONS)))
override_dh_auto_test:
if [ -d $(VDATADIR) ] ; then \
mkdir -p ../vsearch-data && \
for datadir in `find $(VDATADIR) -type d | sed -e "s#$(VDATADIR)/*##" -e "/^$$/d"` ; do mkdir -p ../vsearch-data/$${datadir} ; done && \
for datafile in `find $(VDATADIR) -type f` ; do \
ln -s $${datafile} `echo $${datafile} | sed -e "s#$(VDATADIR)/#../vsearch-data/#"` ; \
done && \
zcat ../vsearch-data/BioMarKs.fsa.gz > ../vsearch-data/BioMarKs.fsa && \
cd test && \
for t in *.sh ; do \
bash $$t v ; \
done && \
cd .. && \
rm -rf ../vsearch-data ; \
fi
endif
override_dh_clean:
dh_clean
rm -rf data/simm
if [ -d test ] ; then find test -mindepth 1 -not -name '*.sh' -delete ; fi
rm -f README.html data/README.html
rm -f *.out
override_dh_install:
dh_install
if [ -d test ] ; then \
mkdir -p $(docdir)/test ; \
for tst in test/*.sh ; do sed 's?\.\./bin/vsearch?/usr/bin/vsearch?' $${tst} > $(docdir)/$${tst} ; done ; \
fi
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