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/* File edhead.c
* October 31, 2006
* By Jessica Mink, Harvard-Smithsonian Center for Astrophysics
* Send bug reports to jmink@cfa.harvard.edu
Copyright (C) 2006
Smithsonian Astrophysical Observatory, Cambridge, MA USA
This program is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License
as published by the Free Software Foundation; either version 2
of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software Foundation,
Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
*/
#include <stdlib.h>
#include <stdio.h>
#include <string.h>
#include <fcntl.h>
#include <errno.h>
#include <unistd.h>
#include <sys/types.h>
#include <sys/stat.h>
#include <math.h>
#include "libwcs/fitsfile.h"
#include "libwcs/wcs.h"
static void usage();
static void EditHead();
static int newimage = 0;
static int verbose = 0; /* verbose flag */
static char *editcom0; /* Editor command from command line */
static char *RevMsg = "EDHEAD WCSTools 3.9.7, 26 April 2022, Jessica Mink (jmink@cfa.harvard.edu)";
static int version = 0; /* If 1, print only program name and version */
int
main (ac, av)
int ac;
char **av;
{
char *str;
editcom0 = NULL;
/* Check for help or version command first */
str = *(av+1);
if (!str || !strcmp (str, "help") || !strcmp (str, "-help"))
usage();
if (!strcmp (str, "version") || !strcmp (str, "-version")) {
version = 1;
usage();
}
/* crack arguments */
for (av++; --ac > 0 && *(str = *av) == '-'; av++) {
char c;
while ((c = *++str))
switch (c) {
case 'v': /* more verbosity */
verbose++;
break;
case 'n': /* ouput new file */
newimage++;
break;
case 'e': /* Specify editor */
if (ac < 2)
usage ();
editcom0 = *++av;
ac--;
break;
default:
usage();
break;
}
}
/* now there are ac remaining file names starting at av[0] */
if (ac == 0)
usage();
while (ac-- > 0) {
char *fn = *av++;
EditHead (fn);
if (verbose)
printf ("\n");
}
return (0);
}
static void
usage ()
{
fprintf (stderr,"%s\n",RevMsg);
if (version)
exit (-1);
fprintf (stderr,"Edit header of FITS or IRAF image file\n");
fprintf(stderr,"usage: edhead [-nv] [-e editor] file.fits file.imh...\n");
fprintf(stderr," -e: Set editor, overriding environment EDITOR \n");
fprintf(stderr," -n: write new file, else overwrite \n");
fprintf(stderr," -v: verbose\n");
exit (1);
}
static void
EditHead (filename)
char *filename; /* FITS or IRAF file filename */
{
char *image; /* FITS image */
char *header; /* FITS header */
int lhead; /* Maximum number of bytes in FITS header */
int nbhead; /* Actual number of bytes in FITS header */
int nbold, nbnew;
int iraffile; /* 1 if IRAF image */
char *irafheader = NULL; /* IRAF image header */
int i, nbytes, nhb, nhblk, lext, lroot;
int fdr, ipos, nbr, nbw;
int fdw;
int naxis = 0;
int nblock, nlines;
int bitpix = 0;
int imageread = 0;
char *head, *headend, *hlast;
char headline[160];
char newname[128];
char space;
char temphead[] = "/tmp/edheadXXXXXX";
FILE *fd;
char *ext, *fname, *imext, *imext1;
char *editcom;
char newline[1];
char echar;
newline[0] = 10;
space = (char) 32;
image = NULL;
/* Open IRAF image and header if .imh extension is present */
if (isiraf (filename)) {
iraffile = 1;
if ((irafheader = irafrhead (filename, &lhead)) != NULL) {
if ((header = iraf2fits (filename, irafheader, lhead, &nbhead)) == NULL) {;
free (irafheader);
fprintf (stderr, "Cannot translate IRAF header %s/n", filename);
return;
}
}
else {
fprintf (stderr, "Cannot read IRAF header file %s\n", filename);
return;
}
}
/* Read FITS image and header if .imh extension is not present */
else {
iraffile = 0;
if ((header = fitsrhead (filename, &lhead, &nbhead)) != NULL) {
hgeti4 (header,"NAXIS",&naxis);
hgeti4 (header,"BITPIX",&bitpix);
if ((image = fitsrfull (filename, nbhead, header)) == NULL) {
fprintf (stderr, "Cannot read FITS image %s\n", filename);
imageread = 0;
}
else
imageread = 1;
}
else {
fprintf (stderr, "Cannot read FITS file %s\n", filename);
return;
}
}
if (verbose)
fprintf (stderr,"%s\n",RevMsg);
nbold = fitsheadsize (header);
/* Write current header to temporary file */
fd = fdopen (mkstemp (temphead), "w");
if (fd != NULL) {
headend = ksearch (header, "END") + 80;
for (head = header; head < headend; head = head + 80) {
for (i = 0; i< 80; i++)
headline[i] = 0;
strncpy (headline,head,80);
for (i = 0; i < 80; i++) {
if (headline[i] < space)
headline[i] = space;
}
for (i = 79; i > 0; i--) {
if (headline[i] == ' ')
headline[i] = 0;
else
break;
}
nbytes = i + 1;
(void) fwrite (headline, 1, nbytes, fd);
(void) fwrite (newline, 1, 1, fd);
}
fclose (fd);
free (header);
}
else {
fprintf (stderr, "Cannot write temporary header file %s\n", temphead);
free (header);
if (iraffile)
free (irafheader);
free (image);
return;
}
/* Run an editor on the temporary header file */
editcom = (char *)calloc (1, 256);
if (editcom0 != NULL)
strcpy (editcom, editcom0);
else if ((editcom0 = getenv ("EDITOR")))
strcpy (editcom, editcom0);
else if (access ("vi", X_OK))
strcpy (editcom, "vi");
else if (access ("vim", X_OK))
strcpy (editcom, "vim");
else {
fprintf (stderr, "Cannot find EDITOR or vi or vim\n");
free (header);
if (iraffile)
free (irafheader);
free (image);
return;
}
strcat (editcom," ");
strcat (editcom,temphead);
if (verbose)
printf ("Edit command is '%s'\n",editcom);
if (strncmp (editcom, "none", 4) &&
strncmp (editcom, "NONE", 4)) {
if (system (editcom)) {
free (header);
if (iraffile)
free (irafheader);
free (image);
unlink (temphead);
free (editcom);
return;
}
}
/* Read the new header from the temporary file */
if ((nlines = getfilelines (temphead)) > 0) {
nbytes = nlines * 80;
nblock = nbytes / 2880;
if (nblock * 2880 < nbytes)
nblock = nblock + 1;
nbytes = nblock * 2880;
header = (char *) calloc (nbytes, 1);
head = header;
hlast = header + nbytes - 1;
for (i = 0; i< 81; i++)
headline[i] = 0;
if ((fd = fopen (temphead, "r")) == NULL) {
fprintf (stderr, "Cannot read edited header file %s\n", temphead);
free (header);
if (iraffile)
free (irafheader);
free (image);
free (editcom);
return;
}
while (fgets (headline,82,fd)) {
int i = 79;
while (headline[i] == (char) 0 || headline[i] == (char) 10)
headline[i--] = ' ';
strncpy (head,headline,80);
head = head + 80;
if (head > hlast) {
nhblk = (head - header) / 2880;
nhb = (nhblk + 10) * 2880;
header = (char *) realloc (header,nhb);
head = header + nhb;
hlast = hlast + 28800;
}
for (i = 0; i< 80; i++)
headline[i] = (char) 0;
}
fclose (fd);
}
else {
fprintf (stderr, "Cannot read temporary header file %s\n", temphead);
free (header);
if (iraffile)
free (irafheader);
free (image);
free (editcom);
return;
}
/* Compare size of output header to size of input header */
nbnew = fitsheadsize (header);
if (nbnew > nbold && naxis == 0 && bitpix != 0) {
if (verbose)
fprintf (stderr, "Rewriting primary header, copying rest of file\n");
newimage = 1;
}
/* Make up name for new FITS or IRAF output file */
if (newimage) {
/* Remove directory path and extension from file name */
fname = strrchr (filename, '/');
if (fname)
fname = fname + 1;
else
fname = filename;
ext = strrchr (fname, '.');
if (ext != NULL) {
lext = (fname + strlen (fname)) - ext;
lroot = ext - fname;
strncpy (newname, fname, lroot);
*(newname + lroot) = 0;
}
else {
lext = 0;
lroot = strlen (fname);
strcpy (newname, fname);
}
imext = strchr (fname, ',');
imext1 = NULL;
if (imext == NULL) {
imext = strchr (fname, '[');
if (imext != NULL) {
imext1 = strchr (fname, ']');
*imext1 = (char) 0;
}
}
if (imext != NULL) {
strcat (newname, "_");
strcat (newname, imext+1);
}
if (fname)
fname = fname + 1;
else
fname = filename;
strcat (newname, "e");
if (lext > 0) {
if (imext != NULL) {
echar = *imext;
*imext = (char) 0;
strcat (newname, ext);
*imext = echar;
if (imext1 != NULL)
*imext1 = ']';
}
else
strcat (newname, ext);
}
}
else {
strcpy (newname, filename);
if (ksearch (header,"XTENSION")) {
strcat (newname, ",1");
imext = strchr (newname,',');
}
}
/* Write fixed header to output file */
if (iraffile) {
if (irafwhead (newname, lhead, irafheader, header) > 0 && verbose)
printf ("%s rewritten successfully.\n", newname);
else if (verbose)
printf ("%s could not be written.\n", newname);
free (irafheader);
}
/* If there is no data, write header by itself */
else if (bitpix == 0) {
if ((fdw = fitswhead (newname, header)) > 0) {
if (verbose)
printf ("%s: rewritten successfully.\n", newname);
close (fdw);
}
}
/* Rewrite only header if it fits into the space from which it was read */
else if (nbnew <= nbold && !newimage) {
if (!fitswexhead (newname, header)) {
if (verbose)
printf ("%s: rewritten successfully.\n", newname);
}
}
/* Rewrite header and data to a new image file */
else if (naxis > 0 && imageread) {
if (fitswimage (newname, header, image) > 0 && verbose)
printf ("%s: rewritten successfully.\n", newname);
else if (verbose)
printf ("%s could not be written.\n", newname);
}
else {
if ((fdw = fitswhead (newname, header)) > 0) {
fdr = fitsropen (filename);
ipos = lseek (fdr, nbhead, SEEK_SET);
image = (char *) calloc (2880, 1);
while ((nbr = read (fdr, image, 2880)) > 0) {
nbw = write (fdw, image, nbr);
if (nbw < nbr)
fprintf (stderr,"SETHEAD: %d / %d bytes written\n",nbw,nbr);
}
close (fdr);
close (fdw);
if (verbose)
printf ("%s: rewritten successfully.\n", newname);
}
}
free (header);
if (image)
free (image);
unlink (temphead);
free (editcom);
return;
}
/* Aug 15 1996 New program
* Aug 26 1996 Change HGETC call to HGETS
* Aug 27 1996 Read up to 82 characters per line to get newline
* Aug 29 1996 Allow new file to be written
* Oct 17 1996 Drop unused variables
* Dec 11 1996 Allocate editcom if environment variable is not set
*
* Feb 21 1997 Check pointers against NULL explicitly for Linux
*
* May 20 1998 Set reread buffer size based on temporary file size
* May 26 1998 Version 2.2.1: Fix long-standing .imh writing bug
* May 27 1998 Include fitsio.h instead of fitshead.h
* Jun 2 1998 Fix bug in hput()
* Jun 24 1998 Preserve file extension
* Jul 24 1998 Make irafheader char instead of int
* Oct 14 1998 Use isiraf() to determine file type
* Nov 30 1998 Add version and help commands for consistency
* Dec 2 1998 Create and delete temporary file for header being edited
* Dec 30 1998 Write header without image if no image is present
*
* Oct 21 1999 Drop unused variables after lint
* Nov 24 1999 Do not invoke editor if it is none or NONE
* Nov 24 1999 Add -e to set editor on command line
* Nov 24 1999 Set characters less than 32 in header string to space
* Nov 29 1999 Fix bug so environment editor is used correctly
*
* Apr 9 2002 Do not free unallocated header
*
* Aug 21 2003 Use fitsrfull() to handle any simple FITS image
* Jul 1 2004 Change first extension if no extension specified
* Jul 1 2004 Overwrite edited header, if new header fits
*
* Apr 14 2005 Set new header size by number of lines in temporary file
*
* Feb 1 2006 Drop redundant free(image) found by Sergey Koposov
* Jun 12 2006 Use mkstemp() instead of tempnam() suggested by Sergio Pascual
* Jun 20 2006 Clean up code
* Sep 1 2006 Change temphead declaration to [] from *
* Oct 31 2006 Check for vim as well as vi if EDITOR not in environment
*/
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