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#include "wgriddingmsgridder.h"
#include "wgridder.h"
#include "../gridding/msgriddermanager.h"
#include "../msproviders/msreaders/msreader.h"
#include "../msproviders/msprovider.h"
#include "../system/buffered_lane.h"
#include "../structures/imageweights.h"
#include <aocommon/image.h>
#include <aocommon/logger.h>
#include <schaapcommon/math/resampler.h>
#include <casacore/ms/MeasurementSets/MeasurementSet.h>
using aocommon::Image;
using aocommon::Logger;
namespace wsclean {
namespace {
constexpr size_t kUvwSize = sizeof(double) * 3;
} // namespace
WGriddingMSGridder::WGriddingMSGridder(
const Settings& settings, const Resources& resources,
MsProviderCollection& ms_provider_collection, bool use_tuned_wgridder)
: MsGridder(settings, ms_provider_collection),
resources_(resources),
accuracy_(GetSettings().gridder_accuracy),
use_tuned_wgridder_(use_tuned_wgridder) {
// It may happen that several schaapcommon::fft::Resamplers are created
// concurrently, so we must make sure that the FFTW planner can deal with
// this.
fftwf_make_planner_thread_safe();
}
WGriddingMSGridder::~WGriddingMSGridder() = default;
std::unique_ptr<WGridderBase> WGriddingMSGridder::MakeGridder(
size_t width, size_t height) const {
if (accuracy_ <= 1.01e-5) {
return std::make_unique<WGridder<double>>(
ActualInversionWidth(), ActualInversionHeight(), width, height,
ActualPixelSizeX(), ActualPixelSizeY(), LShift(), MShift(),
resources_.NCpus(), accuracy_, 0, use_tuned_wgridder_);
} else {
return std::make_unique<WGridder<float>>(
ActualInversionWidth(), ActualInversionHeight(), width, height,
ActualPixelSizeX(), ActualPixelSizeY(), LShift(), MShift(),
resources_.NCpus(), accuracy_, 0, use_tuned_wgridder_);
}
}
size_t WGriddingMSGridder::CalculateConstantMemory() const {
size_t constant_mem = gridder_->ConstantMemoryUsage();
constant_mem += GetVisibilityModifier().GetCacheParmResponseSize();
return constant_mem;
}
size_t WGriddingMSGridder::CalculateMaxRowsInMemory(
int64_t available_memory, size_t constant_memory,
double additional_per_row_consumption, size_t per_row_uvw_consumption,
size_t channel_count, size_t num_polarizations_stored) const {
if (static_cast<int64_t>(constant_memory) >= available_memory) {
// Assume that half the memory is necessary for the constant parts (like
// image grid), and the other half remains available for the dynamic buffers
constant_memory = available_memory / 2;
Logger::Warn << "Not enough memory available for doing the gridding:\n"
"swapping might occur!\n";
}
const size_t per_visibility_ducc_overhead =
gridder_->PerVisibilityMemoryUsage();
// Internal DUCC size and size we might be storing in memory are different as
// we collapse the visibilities before passing them in to DUCC
const size_t per_row_visibility_memory =
(per_visibility_ducc_overhead * channel_count) +
(sizeof(std::complex<float>) * channel_count * num_polarizations_stored);
// Keep computed number floating point to maintain precision.
// This is because additional_per_row_consumption can be fractional in the
// case of -shared-facet-writes; where gridders/facets share some per row
// memory overheads with each other. In this instance we allocate a fractional
// portion of this shared memory to each gridder to help compute maximum rows
// more accurately.
const double memory_per_row =
additional_per_row_consumption // external overheads
+ per_row_visibility_memory // visibilities
+ per_row_uvw_consumption; // uvw
const uint64_t memory_for_buffers = available_memory - constant_memory;
const size_t max_n_rows =
std::max(uint64_t(memory_for_buffers / memory_per_row), uint64_t(100));
if (max_n_rows < 1000) {
Logger::Warn << "Less than 1000 data rows fit in memory: this probably "
"means performance is going to be very poor!\n";
}
return max_n_rows;
}
size_t WGriddingMSGridder::CalculateMaxVisibilitiesInMemory(
int64_t available_memory, size_t constant_memory,
double additional_per_visibility_consumption,
size_t per_visibility_uvw_consumption,
size_t num_polarizations_stored) const {
// Function follows mostly the logic of CalculateMaxRowsInMemory().
if (static_cast<int64_t>(constant_memory) >= available_memory) {
constant_memory = available_memory / 2;
Logger::Warn << "Not enough memory available for doing the gridding:\n"
"swapping might occur!\n";
}
const size_t per_visibility_ducc_overhead =
gridder_->PerVisibilityMemoryUsage();
const size_t per_visibility_memory =
per_visibility_ducc_overhead +
(sizeof(std::complex<float>) * num_polarizations_stored);
const double memory_per_visibility =
additional_per_visibility_consumption // external overheads
+ per_visibility_memory // visibilities
+ per_visibility_uvw_consumption; // uvw
const uint64_t memory_for_buffers = available_memory - constant_memory;
// This value is a bit arbitrary, but gridding less than 10000 vis at a time
// will be prohabitively slow...
constexpr uint64_t kMinVisibilities = 10000;
const size_t max_n_visibilities = std::max(
uint64_t(memory_for_buffers / memory_per_visibility), kMinVisibilities);
return max_n_visibilities;
}
void WGriddingMSGridder::GridSharedMeasurementSetChunk(
bool apply_corrections, size_t n_polarizations, size_t n_rows,
const double* uvws, const double* frequencies,
const aocommon::BandData& selected_band, size_t data_desc_id,
const std::pair<size_t, size_t>* antennas,
const std::complex<float>* visibilities, const size_t* time_offsets,
size_t n_antennas, const std::vector<std::complex<float>>& parm_response,
const BeamResponseCacheChunk& beam_response) {
// If there are no corrections to apply then we can bypass needing a callback
// and just use the shared buffer directly
if (!apply_corrections) {
gridder_->AddInversionData(n_rows, selected_band.ChannelCount(), uvws,
frequencies, visibilities);
} else {
VisibilityCallbackData data(selected_band.ChannelCount(), selected_band,
data_desc_id, antennas, visibilities, uvws,
time_offsets, this, n_antennas,
parm_response.data(), beam_response);
gridder_->AddInversionDataWithCorrectionCallback(
GetGainMode(), n_polarizations, n_rows, uvws, frequencies, data);
}
}
size_t WGriddingMSGridder::GridRegularMeasurementSet(
const MsProviderCollection::MsData& ms_data) {
// Regular data should always have one band per ms provider...
const aocommon::MultiBandData& selected_bands(
ms_data.ms_provider->SelectedBands());
assert(selected_bands.BandCount() == 1);
const aocommon::BandData& selected_band = *selected_bands.begin();
const size_t n_vis_polarizations = ms_data.ms_provider->NPolarizations();
const size_t data_size = selected_band.ChannelCount() * n_vis_polarizations;
aocommon::UVector<std::complex<float>> model_buffer(data_size);
aocommon::UVector<float> weight_buffer(data_size);
aocommon::UVector<bool> selection_buffer(selected_band.ChannelCount(), true);
aocommon::UVector<double> frequencies(selected_band.ChannelCount());
for (size_t i = 0; i != frequencies.size(); ++i)
frequencies[i] = selected_band.ChannelFrequency(i);
size_t max_rows_per_chunk =
CalculateMaxRowsInMemory(resources_.Memory(), CalculateConstantMemory(),
0, kUvwSize, selected_band.ChannelCount(), 1);
aocommon::UVector<std::complex<float>> visibility_buffer(
max_rows_per_chunk * selected_band.ChannelCount());
aocommon::UVector<double> uvw_buffer(max_rows_per_chunk * 3);
std::unique_ptr<MSReader> ms_reader = ms_data.ms_provider->MakeReader();
aocommon::UVector<std::complex<float>> row_visibilities(data_size);
InversionRow row_data;
row_data.data = row_visibilities.data();
const size_t n_parms = NumValuesPerSolution();
// Iterate over chunks until all data has been gridded
size_t n_total_rows_read = 0;
Logger::Debug << "Max " << max_rows_per_chunk << " rows fit in memory.\n";
while (ms_reader->CurrentRowAvailable()) {
Logger::Info << "Loading data in memory...\n";
size_t n_chunk_rows_read = 0;
// Read / fill the chunk
while (ms_reader->CurrentRowAvailable() &&
n_chunk_rows_read < max_rows_per_chunk) {
MSProvider::MetaData metadata;
ms_reader->ReadMeta(metadata);
row_data.uvw[0] = metadata.u_in_m;
row_data.uvw[1] = metadata.v_in_m;
row_data.uvw[2] = metadata.w_in_m;
if (n_parms == 2) {
GetCollapsedVisibilities<2>(*ms_reader, ms_data.antenna_names.size(),
row_data, weight_buffer.data(),
model_buffer.data(),
selection_buffer.data(), metadata);
} else {
GetCollapsedVisibilities<4>(*ms_reader, ms_data.antenna_names.size(),
row_data, weight_buffer.data(),
model_buffer.data(),
selection_buffer.data(), metadata);
}
std::copy_n(
row_data.data, selected_band.ChannelCount(),
&visibility_buffer[n_chunk_rows_read * selected_band.ChannelCount()]);
std::copy_n(row_data.uvw, 3, &uvw_buffer[n_chunk_rows_read * 3]);
++n_chunk_rows_read;
ms_reader->NextInputRow();
}
Logger::Info << "Gridding " << n_chunk_rows_read << " rows...\n";
gridder_->AddInversionData(n_chunk_rows_read, selected_band.ChannelCount(),
uvw_buffer.data(), frequencies.data(),
visibility_buffer.data());
n_total_rows_read += n_chunk_rows_read;
} // end of chunk
return n_total_rows_read;
}
size_t WGriddingMSGridder::GridBdaMeasurementSet(
const MsProviderCollection::MsData& ms_data) {
const aocommon::MultiBandData& selected_bands(
ms_data.ms_provider->SelectedBands());
const size_t n_vis_polarizations = ms_data.ms_provider->NPolarizations();
const size_t max_data_size =
ms_data.ms_provider->NMaxChannels() * n_vis_polarizations;
aocommon::UVector<std::complex<float>> model_buffer(max_data_size);
aocommon::UVector<float> weight_buffer(max_data_size);
aocommon::UVector<bool> selection_buffer(max_data_size, true);
const size_t max_vis_per_chunk = CalculateMaxVisibilitiesInMemory(
resources_.Memory(), CalculateConstantMemory(), 0, kUvwSize, 1);
aocommon::UVector<std::complex<float>> visibility_buffer;
visibility_buffer.reserve(max_vis_per_chunk);
aocommon::UVector<double> uvw_buffer;
uvw_buffer.reserve(3 * max_vis_per_chunk);
std::unique_ptr<MSReader> ms_reader = ms_data.ms_provider->MakeReader();
aocommon::UVector<std::complex<float>> row_visibilities(max_data_size);
InversionRow row_data;
row_data.data = row_visibilities.data();
const size_t n_parms = NumValuesPerSolution();
// Iterate over chunks until all data has been gridded
size_t n_total_rows_read = 0;
while (ms_reader->CurrentRowAvailable()) {
Logger::Info << "Loading data in memory...\n";
size_t n_chunk_rows_read = 0;
visibility_buffer.clear();
uvw_buffer.clear();
// Read / fill the chunk
while (ms_reader->CurrentRowAvailable()) {
MSProvider::MetaData metadata;
ms_reader->ReadMeta(metadata);
row_data.uvw[0] = metadata.u_in_m;
row_data.uvw[1] = metadata.v_in_m;
row_data.uvw[2] = metadata.w_in_m;
const aocommon::BandData& band = selected_bands[metadata.data_desc_id];
if (visibility_buffer.size() + band.ChannelCount() >= max_vis_per_chunk)
break;
if (n_parms == 2) {
GetCollapsedVisibilities<2>(*ms_reader, ms_data.antenna_names.size(),
row_data, weight_buffer.data(),
model_buffer.data(),
selection_buffer.data(), metadata);
} else {
GetCollapsedVisibilities<4>(*ms_reader, ms_data.antenna_names.size(),
row_data, weight_buffer.data(),
model_buffer.data(),
selection_buffer.data(), metadata);
}
for (size_t channel = 0; channel != band.ChannelCount(); ++channel) {
// Because the gridder doesn't have an option to have different nr of
// channels per row, the data is "flattened" into a single array and the
// uvws are scaled so that they become frequency independent.
visibility_buffer.emplace_back(row_data.data[channel]);
for (size_t i = 0; i != 3; ++i)
uvw_buffer.emplace_back(row_data.uvw[i] *
band.ChannelFrequency(channel));
}
++n_chunk_rows_read;
ms_reader->NextInputRow();
}
Logger::Info << "Gridding " << n_chunk_rows_read
<< " (irregular) rows...\n";
// The Uvws have been scaled by the frequency already, hence use 1 here.
constexpr double kDummyFrequency = 1.0;
// Data has been flattened, so for the gridder there's only one channel:
constexpr size_t kNGridderChannels = 1;
gridder_->AddInversionData(visibility_buffer.size(), kNGridderChannels,
uvw_buffer.data(), &kDummyFrequency,
visibility_buffer.data());
n_total_rows_read += n_chunk_rows_read;
} // end of chunk
return n_total_rows_read;
}
void WGriddingMSGridder::PredictChunk(size_t n_rows, size_t n_channels,
const double* frequencies,
const double* uvws,
std::complex<float>* visibilities) const {
Logger::Info << "Predicting " + std::to_string(n_rows) + " rows...\n";
gridder_->PredictVisibilities(n_rows, n_channels, uvws, frequencies,
visibilities);
}
size_t WGriddingMSGridder::PredictRegularMeasurementSet(
const MsProviderCollection::MsData& ms_data) {
const aocommon::MultiBandData& selected_bands(
ms_data.ms_provider->SelectedBands());
// Regular data should always have one band...
assert(selected_bands.BandCount() == 1);
const aocommon::BandData& selected_band = *selected_bands.begin();
size_t n_total_rows_written = 0;
aocommon::UVector<double> frequencies(selected_band.ChannelCount());
for (size_t i = 0; i != frequencies.size(); ++i)
frequencies[i] = selected_band.ChannelFrequency(i);
const size_t max_rows_per_chunk =
CalculateMaxRowsInMemory(resources_.Memory(), CalculateConstantMemory(),
0, kUvwSize, selected_band.ChannelCount(), 1);
aocommon::UVector<double> uvw_buffer(max_rows_per_chunk * 3);
// Iterate over chunks until all data has been gridded
ms_data.ms_provider->ResetWritePosition();
std::unique_ptr<MSReader> ms_reader = ms_data.ms_provider->MakeReader();
while (ms_reader->CurrentRowAvailable()) {
size_t n_chunk_rows_read = 0;
// Read / fill the chunk
Logger::Info << "Loading metadata...\n";
// Read from metadata buffer
std::vector<MSProvider::MetaData> metadata_buffer;
while (ms_reader->CurrentRowAvailable() &&
n_chunk_rows_read < max_rows_per_chunk) {
MSProvider::MetaData metadata;
ReadPredictMetaData(metadata);
uvw_buffer[n_chunk_rows_read * 3] = metadata.u_in_m;
uvw_buffer[n_chunk_rows_read * 3 + 1] = metadata.v_in_m;
uvw_buffer[n_chunk_rows_read * 3 + 2] = metadata.w_in_m;
metadata_buffer.emplace_back(std::move(metadata));
n_chunk_rows_read++;
ms_reader->NextInputRow();
}
Logger::Info << "Predicting " << n_chunk_rows_read << " rows...\n";
aocommon::UVector<std::complex<float>> visibility_buffer(
max_rows_per_chunk * selected_band.ChannelCount());
gridder_->PredictVisibilities(
n_chunk_rows_read, selected_band.ChannelCount(), uvw_buffer.data(),
frequencies.data(), visibility_buffer.data());
Logger::Info << "Writing...\n";
for (size_t row = 0; row != n_chunk_rows_read; ++row) {
WriteCollapsedVisibilities(
*ms_data.ms_provider, ms_data.antenna_names.size(),
metadata_buffer[row].data_desc_id,
&visibility_buffer[row * selected_band.ChannelCount()],
&uvw_buffer[row * 3], metadata_buffer[row].field_id,
metadata_buffer[row].antenna1, metadata_buffer[row].antenna2,
metadata_buffer[row].time);
}
n_total_rows_written += n_chunk_rows_read;
} // end of chunk
return n_total_rows_written;
}
size_t WGriddingMSGridder::PredictBdaMeasurementSet(
const MsProviderCollection::MsData& ms_data) {
const aocommon::MultiBandData& selected_bands(
ms_data.ms_provider->SelectedBands());
size_t n_total_rows_written = 0;
const size_t max_vis_per_chunk = CalculateMaxVisibilitiesInMemory(
resources_.Memory(), CalculateConstantMemory(), 0, kUvwSize, 1);
aocommon::UVector<double> uvw_buffer;
uvw_buffer.reserve(3 * max_vis_per_chunk);
// Iterate over chunks until all data has been gridded
ms_data.ms_provider->ResetWritePosition();
std::unique_ptr<MSReader> ms_reader = ms_data.ms_provider->MakeReader();
std::vector<MSProvider::MetaData> metadata_buffer;
while (ms_reader->CurrentRowAvailable()) {
size_t n_chunk_rows_read = 0;
// Read / fill the chunk
Logger::Info << "Loading metadata...\n";
metadata_buffer.clear();
uvw_buffer.clear();
size_t visibility_count = 0;
while (ms_reader->CurrentRowAvailable()) {
MSProvider::MetaData metadata;
ReadPredictMetaData(metadata);
const aocommon::BandData& band = selected_bands[metadata.data_desc_id];
if (visibility_count + band.ChannelCount() >= max_vis_per_chunk) break;
visibility_count += band.ChannelCount();
for (size_t channel = 0; channel != band.ChannelCount(); ++channel) {
const double frequency = band.ChannelFrequency(channel);
uvw_buffer.emplace_back(metadata.u_in_m * frequency);
uvw_buffer.emplace_back(metadata.v_in_m * frequency);
uvw_buffer.emplace_back(metadata.w_in_m * frequency);
}
metadata_buffer.emplace_back(std::move(metadata));
n_chunk_rows_read++;
ms_reader->NextInputRow();
}
Logger::Info << "Predicting " << n_chunk_rows_read
<< " (irregular) rows...\n";
aocommon::UVector<std::complex<float>> visibility_buffer(visibility_count);
// The Uvws have been scaled by the frequency already, hence use 1 here.
constexpr double kDummyFrequency = 1.0;
// Data has been flattened, so for the gridder there's only one channel:
constexpr size_t kNGridderChannels = 1;
gridder_->PredictVisibilities(visibility_count, kNGridderChannels,
uvw_buffer.data(), &kDummyFrequency,
visibility_buffer.data());
Logger::Info << "Writing...\n";
std::complex<float>* visibility_ptr = visibility_buffer.data();
for (size_t row = 0; row != n_chunk_rows_read; ++row) {
// The uvw_buffer has scaled uvws, so reload them from the metadata
const double uvw[3] = {metadata_buffer[row].u_in_m,
metadata_buffer[row].v_in_m,
metadata_buffer[row].w_in_m};
WriteCollapsedVisibilities(
*ms_data.ms_provider, ms_data.antenna_names.size(),
metadata_buffer[row].data_desc_id, visibility_ptr, uvw,
metadata_buffer[row].field_id, metadata_buffer[row].antenna1,
metadata_buffer[row].antenna2, metadata_buffer[row].time);
const aocommon::BandData& band =
selected_bands[metadata_buffer[row].data_desc_id];
visibility_ptr += band.ChannelCount();
}
n_total_rows_written += n_chunk_rows_read;
} // end of chunk
return n_total_rows_written;
}
size_t WGriddingMSGridder::GridMeasurementSet(
const MsProviderCollection::MsData& ms_data) {
// If the data isn't regular, the data is flattened before calling the
// gridder. This costs more memory and may potentially be a bit slower or
// cause more gridder calls, so flattening is done only when it is necessary.
if (ms_data.ms_provider->IsRegular()) {
return GridRegularMeasurementSet(ms_data);
} else {
return GridBdaMeasurementSet(ms_data);
}
}
size_t WGriddingMSGridder::PredictMeasurementSet(
const MsProviderCollection::MsData& ms_data) {
ms_data.ms_provider->ReopenRW();
// See comment in GridMeasurementSet().
if (ms_data.ms_provider->IsRegular()) {
return PredictRegularMeasurementSet(ms_data);
} else {
return PredictBdaMeasurementSet(ms_data);
}
}
void WGriddingMSGridder::GetActualTrimmedSize(size_t& trimmedWidth,
size_t& trimmedHeight) const {
trimmedWidth = std::ceil(ActualInversionWidth() / ImagePadding());
trimmedHeight = std::ceil(ActualInversionHeight() / ImagePadding());
// In facet-based imaging, the alignment is 4, see wsclean.cpp. Also for
// monolithic imaging - in which just an even number would suffice -
// the trimmedWidth and trimmedHeight are defined to be divisable by 4.
const size_t alignment = 4;
if (trimmedWidth % alignment != 0) {
trimmedWidth += alignment - (trimmedWidth % alignment);
}
if (trimmedHeight % alignment != 0) {
trimmedHeight += alignment - (trimmedHeight % alignment);
}
trimmedWidth = std::min(trimmedWidth, ActualInversionWidth());
trimmedHeight = std::min(trimmedHeight, ActualInversionHeight());
}
void WGriddingMSGridder::StartInversion() {
size_t trimmed_width;
size_t trimmed_height;
GetActualTrimmedSize(trimmed_width, trimmed_height);
gridder_ = MakeGridder(trimmed_width, trimmed_height);
gridder_->InitializeInversion();
ResetVisibilityCounters();
}
void WGriddingMSGridder::FinishInversion() {
gridder_->FinalizeImage(1.0 / ImageWeight());
std::string log_message =
"Gridded visibility count: " + std::to_string(GriddedVisibilityCount());
if (Weighting().IsNatural()) {
log_message += ", effective count after weighting: " +
std::to_string(EffectiveGriddedVisibilityCount());
}
Logger::Info << log_message + '\n';
image_ = Image(ActualInversionWidth(), ActualInversionHeight());
{
std::vector<float> image_float = gridder_->RealImage();
std::copy(image_float.begin(), image_float.end(), image_.begin());
}
if (ImageWidth() != ActualInversionWidth() ||
ImageHeight() != ActualInversionHeight()) {
// Interpolate the image
// The input is of size ActualInversionWidth() x ActualInversionHeight()
schaapcommon::math::Resampler resampler(
ActualInversionWidth(), ActualInversionHeight(), ImageWidth(),
ImageHeight(), resources_.NCpus());
Image resized(ImageWidth(), ImageHeight());
resampler.Resample(image_.Data(), resized.Data());
image_ = std::move(resized);
}
if (TrimWidth() != ImageWidth() || TrimHeight() != ImageHeight()) {
Logger::Debug << "Trimming " + std::to_string(ImageWidth()) + " x " +
std::to_string(ImageHeight()) + " -> " +
std::to_string(TrimWidth()) + " x " +
std::to_string(TrimHeight()) + "\n";
image_ = image_.Trim(TrimWidth(), TrimHeight());
}
}
void WGriddingMSGridder::StartPredict(std::vector<Image>&& images) {
size_t trimmed_width;
size_t trimmed_height;
GetActualTrimmedSize(trimmed_width, trimmed_height);
gridder_ = MakeGridder(trimmed_width, trimmed_height);
if (TrimWidth() != ImageWidth() || TrimHeight() != ImageHeight()) {
Image untrimmed_image(ImageWidth(), ImageHeight());
Logger::Debug << "Untrimming " + std::to_string(TrimWidth()) + " x " +
std::to_string(TrimHeight()) + " -> " +
std::to_string(ImageWidth()) + " x " +
std::to_string(ImageHeight()) + "\n";
Image::Untrim(untrimmed_image.Data(), ImageWidth(), ImageHeight(),
images[0].Data(), TrimWidth(), TrimHeight());
images[0] = std::move(untrimmed_image);
}
if (ImageWidth() != ActualInversionWidth() ||
ImageHeight() != ActualInversionHeight()) {
Image resampled_image(ActualInversionWidth(), ActualInversionHeight());
schaapcommon::math::Resampler resampler(
ImageWidth(), ImageHeight(), ActualInversionWidth(),
ActualInversionHeight(), resources_.NCpus());
resampler.Resample(images[0].Data(), resampled_image.Data());
images[0] = std::move(resampled_image);
}
gridder_->InitializePrediction(images[0].Data());
images[0].Reset();
}
void WGriddingMSGridder::FinishPredict() {}
} // namespace wsclean
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