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==========================================================
:class:`PlotPanel`: A wx.Panel for Basic Line Plots
==========================================================
.. module:: plotpanel
The :class:`PlotPanel` class supports standard line plots, including
scatter plots. It has both an easy-to-use programming interface, and a rich
graphical user interface for manipulating the plot after it has been drawn.
The :class:`PlotPanel` class is derived from a :class:`wx.Panel` and so that
it can be included anywhere in a wx Window object that a normal
:class:`wx.Panel` can be put. In addition to drawing a plot, a
:class:`PlotPanel` provides the following capabilities to the end-user:
1. display x, y coordinates as the mouse move.
2. display x, y coordinates of last left-click.
3. zoom in on a particular region of the plot with left-drag in a
lineplot, or draw a 'lasso' around selected points in a scatterplot.
4. customize titles, labels, legend, colors, linestyles, markers, and
whether a grid and a legend is shown. A separate configuration
window is displayed to give users control of these settings.
5. save high-quality plot images (as PNGs), or copy to system
clipboard, or print.
In addition, there is a :class:`PlotFrame` widget which creates a
stand-alone :class:`wx.Frame` that contains a :class:`PlotPanel`, a
:class:`wx.StatusBar`, and a :class:`wx.MenuBar`. Both :class:`PlotPanel`
and :class:`PlotFrame` classes have the basic plotting methods of
:meth:`plot` to make a new plot with a single trace, and :meth:`oplot` to
overplot another trace on top of an existing plot. These each take 2
equal-length numpy arrays (abscissa, ordinate) for each trace, and a host
of optional arguments. The :class:`PlotPanel` and :class:`PlotFrame` have
many additional methods to interact with the plots.
.. class:: PlotPanel(parent, size=(700, 450), dpi=150, fontsize=9, **kws)
Create a Plot Panel, a :class:`wx.Panel` with a matplotlib Figure.
This takes many optional arguments:
:param parent: wx parent object.
:param size: figure size in wxPython pixel coordinates ((700, 450)).
:type size: wx.Size or tuple of 2 integers.
:param dpi: dots per inch for figure (150).
:type dpi: integer
:param axisbg: background colour for Axis ('#FEFEFE').
:type axisbg: valid colour name
:param fontsize: font size for wxFont for labels and ticks (9).
:type fontsize: integer
:param output_title: string to use for output plots ('plot').
:param messenger: function to use for writing output messages (``None``).
:type messenger: callable or ``None``
:param trace_color_callback: function to call when a color changes (``None``).
:type trace_color_callback: callable or ``None``
:param show_config_popup: whether to enable a popup-menu on right-click.
:type show_config_popup: ``True``/``False``
The *size*, and *dpi* arguments are sent to matplotlib's
:class:`Figure`. The *messenger* should should be a function that
accepts text messages from the panel for informational display. The
default value is to use :func:`sys.stdout.write`.
The *show_config_popup* arguments controls whether to bind right-click
to showing a poup menu with options to zoom in or out, configure the
plot, or save the image to a file.
Keyword parameters in ``**kws`` other than those listed above are sent to the wx.Panel.
:class:`PlotPanel` methods
=============================================
.. method:: plot(x, y, **kws)
Draw a plot of the numpy arrays *x* and *y*, erasing any existing plot. The
displayed curve for these data is called a *trace*. The :meth:`plot` method
has many optional parameters, all using keyword/value argument. Since most
of these are shared with the :meth:`oplot` method, the full set of parameters
is given in :ref:`Table of Plot Arguments <plotopt_table>`
.. method:: oplot(x, y, **kws)
Draw a plot of the numpy arrays *x* and *y*, overplotting any existing
plot, so that both traces are visible.
The :meth:`oplot` method has many optional parameters, as listed in
:ref:`Table of Plot Arguments <plotopt_table>`
.. _plotopt_table:
**Table of Plot Arguments** These arguments apply for the :meth:`plot`, :meth:`oplot`, and
:meth:`scatterplot` methods. Except where noted, the arguments are available for :meth:`plot` and
:meth:`oplot`. In addition, the :meth:`scatterplot` method uses many of the same arguments for the
same meaning, as indicated by the right-most column.
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| argument | type | default | meaning |note | scatterplot?|
+================+============+=========+================================================+=====+=============+
| title | string | None | Plot title | 1 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| ylabel | string | None | abscissa label | 1 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| y2label | string | None | right-hand abscissa label | 1 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| label | string | None | trace label (defaults to 'trace N') | 1 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| theme | str | '' | theme for colors and text size | 2 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| color | string | blue | color to use for trace | 3 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| bgcolor | string | #FEFEFE | color for background of Axis (plot area) | 3 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| framecolor | string | white | color for frame outside Axis | 3 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| gridcolor | string | #E5E5E5 | color for grid lines | 3 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| linewidth | int | 2 | linewidth for trace | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| alpha | float | 1.0 | opacity (from 0 to 1) for trace | 4 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| fill | bool | False | fill to 0 or between [y-dy,y+dy] | 5 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| zorder | int | 10 | depth order of trace (what trace is on top) | 6 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| style | string | solid | line-style for trace (solid, dashed, ...) | 7 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| drawstyle | string | line | style connecting points of trace | 8 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| side | left/right | left | side for y-axis and label | | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| marker | string | None | symbol to show for each point (+, o, ....) | 9 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| markersize | int | 8 | size of marker shown for each point | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| legendfontsize | int | 7 | text size for legend | | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| labelfontsize | int | 9 | text size for Axis labels | | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| dy | array | None | uncertainties for y values; error bars | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| xmin | float | None | minimum displayed x value | 10 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| xmax | float | None | maximum displayed x value | 10 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| ymin | float | None | minimum displayed y value | 10 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| ymax | float | None | maximum displayed y value | 10 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| viewpad | float | 2.5 | percent past data range to pad data limits | 10 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| ylog_scale | bool | False | draw y axis with log(base 10) scale | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| autoscale | bool | True | whether to automatically set plot limits | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| fullbox | bool | True | whether to show top and right Axes lines | 11 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| axes_style | string | 'box' | whether to show top, left, right Axes lines | 11 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| grid | None/bool | None | to show grid lines | | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| show_legend | None/bool | None | whether to display legend (None: leave as is) | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| legend_loc | string | 'ur' | location of legend | 12 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| legend_on | bool | True | whether legend is on Axis | 12 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| delay_draw | bool | False | whether to delay draw until later. | 13 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| refresh | bool | True | whether to refresh display | | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| use_dates | bool | False | to show dates in xlabel (:meth:`plot` only) | 14 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| dates_style | str | '' | aid conversion of floats to time data | 14 | no |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| | **arguments that apply only for** :meth:`scatterplot` | |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| size | int | 10 | size of marker | | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| edgecolor | string | black | edge color of marker | 3 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| selectcolor | string | red | color for selected points | 3 | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
| callback | function | None | user-supplied callback to run on selection | | yes |
+----------------+------------+---------+------------------------------------------------+-----+-------------+
As a general note, the configuration for the plot (title, labels, grid
displays) and for each trace (color, linewidth, ...) are preserved for a
:class:`PlotPanel`. A few specific notes:
1. The title, label, and grid arguments to :meth:`plot` default to ``None``, which
means to use the previously used value.
2. The *theme* will set the color palette and make stylistic choices. Choices
include 'light' (the default), 'white-background', 'dark', 'matplotlib',
'seaborn', 'ggplot', 'bmh', 'fivethirtyeight', 'grayscale', 'dark_background',
'tableau-colorblind10', 'seaborn-bright', 'seaborn-colorblind', 'seaborn-dark',
'seaborn-darkgrid', 'seaborn-dark-palette', 'seaborn-deep', 'seaborn-notebook',
'seaborn-muted', 'seaborn-pastel', 'seaborn-paper', 'seaborn-poster',
'seaborn-talk', 'seaborn-ticks', 'seaborn-white', 'seaborn-whitegrid', and
3. All *color* arguments can be a common color name ("blue", "red", "black", etc), a
standard X11 color names ("cadetblue3", "darkgreen", etc), or an RGB hex color
string of the form "#RRGGBB".
4. The *alpha* opacity value ranges from 0 (transpaent) to 1 (opaque) for the color
used for the line trace and the *fill*. While supplying a color string of the form
"#RRGGBBAA" can also set *alpha*, setting it directly here is more robust and should
be preferred.
5. The *fill* value controls whether to fill under the curve to 0. When `dy` is supplied
for errorbars, using `fill=True` will not show error bars as vertical lines, but fill
in the curve between `y-dy` and `y+dy`.
6. *zorder* is the depth (that is, height above the plane of the screen) to draw the
object at, controlling which element will be on top of others. By default, each
:meth:`oplot` plots at a zorder of 10*(n+1), where n is the counter for the trace.
That is, each subsequent trace is drawn *over* the previous, by defualt.
7. *style* is one of ('solid', 'dashed', 'short dashed', 'long dashed', 'dotted', or
'dash-dot')
8. *drawstyles* is one of (``None``, 'steps-pre', 'steps-mid', or 'steps-post').
``None`` connects points with a straight line between points. The others give
horizontal lines with a vertical step at the starting point ('step-pre'),
mid-point ('step-mid') the ending point ('steps-post'). Note that if displaying
discrete values as a function of time, left-to-right, and want to show a
transition to a new value as a sudden step, you want 'steps-post'.
9. *marker* is one of ('+', 'o', 'x', '^', 'v', '>', '<', '|', '_', 'square',
'diamond', 'thin diamond', 'hexagon', 'pentagon', 'tripod 1', or 'tripod 2').
10. By default, xmin, xmax, ymin, and ymax are set from the data. *viewpad* gives a
percentage of the data range for the view to be extended. That is, with xmin=0,
xmin=100, viewpad=5, the range for x will be [-5, 105].
11. *fullbox* can be used to turn on or off the top and right Axes lines (or spines),
giving a more open figure. The 'axes_style' option gives a little more control --
you can set this to either 'box' for a complete box, 'open' for left and right
Axes lines only (same as *fullbox=False*), or 'bottom' which will suppress the
top, right, and left Axes.
12. *legend_loc* sets the position of the legend on the plot, and is one of 'ur',
'ul', 'cr', 'cl', 'lr' 'll', 'uc', 'lc', or 'cc' for 'upper right' , 'upper
left', 'center right', 'center left', 'lower right', 'lower left', 'upper center',
'lower center', or 'center'.
13. The *delay_draw* option will delay the actual drawing the plot to the
screen. This can be give a noticeable speed up when plotting multiple line traces
at once. See also :meth:`plot_many` for a convenience function to plot many
traces at once.
14. For more on using data with dates or times, see :ref:`sect_datetime`.
All of these values, and a few more settings controlling whether and how to display a plot legend can be
configured interactively (see Plot Configuration).
.. method:: update_line(trace, x, y, side='left', update_limits=True, draw=False)
update an existing trace.
:param trace: integer index for the trace (0 is the first trace)
:param x: array of x values
:param y: array of y values
:param side: which y axis to use ('left' or 'right').
:param update_limits: whether to force an update of the limits.
:param draw: whether to force a redrawing of the canvas.
This function is particularly useful for data that is changing and you
wish to update traces from a previous :meth:`plot` or :meth:`oplot` with
the new (x, y) data without completely redrawing the entire plot. Using
this method is substantially faster than replotting, and should be used
for dynamic plots such as a StripChart.
.. method:: plot_many(xylist, side='left', title=None, xlabel=None, ylabel=None, **kws)
Plot many x, y datasets at a single time. *xylist* should be a list or
tuple of two-element list or tuple of (*x*, *y*) data arrays. Many of
the properties listed in :ref:`Table of Plot Arguments <plotopt_table>`
can be specified.
If plotting many datasets, this method can give a significant speed-up
over calling :meth:`plot` followed by many calls of :meth:`oplot`, as
that will render the full image after each call, while the
:meth:`plot_many` will delay plotting until all the datasets are ready
to be plotted.
.. method:: scatterplot(x, y, **kws)
draws a 2d scatterplot. This is a collection of points that are not meant to imply a specific
order that can be connected by a continuous line. A full list of arguments are listed in
:ref:`Table of Plot Arguments <plotopt_table>`.
.. method:: clear()
Clear the plot.
.. method:: add_text(text, x, y, side='left', rotation=None, ha='left', va='center', family=None, **kws)
add text to the plot.
:param text: text to write
:param x: x coordinate for text
:param y: y coordinate for text
:param side: which axis to use ('left' or 'right') for coordinates.
:param rotation: text rotation: angle in degrees or 'vertical' or 'horizontal'
:param ha: horizontal alignment ('left', 'center', 'right')
:param va: vertical alignment ('top', 'center', 'bottom', 'baseline')
:param family: name of font family ('serif', 'sans-serif', etc)
.. method:: add_arrow(x1, y1, x2, y2, side='left', shape='full', color='black', wdith=0.01, head_width=0.03, overhang=0)
draw arrow from (x1, y1) to (x2, y2).
:param x1: starting x coordinate
:param y1: starting y coordinate
:param x2: endnig x coordinate
:param y2: ending y coordinate
:param side: which axis to use ('left' or 'right') for coordinates.
:param shape: arrow head shape ('full', 'left', 'right')
:param color: arrow fill color ('black')
:param width: width of arrow line (in points. default=0.01)
:param head_width: width of arrow head (in points. default=0.1)
:param overhang: amount the arrow is swept back (in points. default=0)
.. method:: set_xylims(limits[, axes=None[, side=None]])
Set the x and y limits for a plot based on a 2x2 list.
:param limits: x and y limits
:type limits: a 4-element list: [xmin, xmax, ymin, ymax]
:param axes: instance of matplotlib axes to use (i.e, for right or left side y axes)
:param side: set to 'right' to get right-hand axes.
.. method:: get_xylims()
return current x, y limits.
.. method:: unzoom()
unzoom the plot. The x, y limits for interactive zooms are stored, and this function unzooms one level.
.. method:: unzoom_all()
unzoom the plot to the full data range.
.. method:: set_title(title)
set the plot title.
.. method:: set_xlabel(label)
set the label for the ordinate axis.
.. method:: set_ylabel(label)
set the label for the left-hand abscissa axis.
.. method:: set_y2label(label)
set the label for the right-hand abscissa axis.
.. method:: set_bgcol(color)
set the background color for the PlotPanel.
.. method:: write_message(message)
write a message to the messenger. For a :class:`PlotPanel` embedded in
a :class:`PlotFrame`, this will go the the Status Bar.
.. method:: save_figure()
shows a File Dialog to save a PNG image of the current plot.
.. method:: configure()
show plot configuration window for customizing plot.
.. method:: reset_config()
reset the configuration to default settings.
.. _sect_datetime:
Using date-time data with :func:`plot`
===========================================
If the `x` values to be plotted holds date or time data, these can be handled in
a few different formats. In order for the X-axis labels to be properly
displayed as a string showing the date, the values must be eventually converted
to a `matplotlib.dates` object, which uses a floating point number to represent
the number of days since year 0, BCE. The `wxmplot` user is not expected to do
this conversion.
The best way to specify datetime information is to use `datetime` objects
from the `datetime` library. These will be automatically recognized and
properly converted.
If the `x` data is a list or array of integers or floats and `use_dates=True` is
used, the values will be interpreted as Unix timestamps (seconds since 1970),
unless `dates_styles='dates'`, in which case they will be interpreted as
`matplotlib.dates`.
Finally, it is possible to pass in a list or array of strings as `x`, and set
`use_dates=True`. In this case, the `matplotlib.dates.datestr2num` function
will be used convert the string. Of course, whether this actually works well
will depend on the ability of this function to parse and interpret the date
strings used.
:class:`PlotFrame`: a wx.Frame showing a :class:`PlotPanel`
====================================================================
.. module:: plotframe
A :class:`PlotFrame` is a wx.Frame -- a separate window -- that
contains a :class:`PlotPanel` and is decorated with a status bar and
menubar. A :class:`PlotFrame` inherits many of the methods of a
:class:`PlotPanel`, and simply passes the arguments along to the
corresponding methods of the :class:`PlotPanel`. The statusbar will
display live coordintes as the mouse moves on the plot. The built-in
menus include methods for saving, printing and copying an image of the
plot to the system Clipboard, as well as ways to configure many of the
plot attributes.
.. class:: PlotFrame(parent[, size=(700, 450)[, title=None[, **kws]]])
create a plot frame. This frame will have a :data:`panel` member
holding the underlying :class:`PlotPanel`, and have menus and statusbar
for plot interaction.
.. method:: plot(x, y, **kws)
Passed to panel.plot
.. method:: oplot(x, y, **kws)
Passed to panel.oplot
.. method:: scatterplot(x, y, **kws)
Passed to panel.scatterplot
.. method:: clear()
Passed to panel.clear
.. method:: update_trace(x, y, **kws)
Passed to panel.update_trace
.. method:: reset_config(x, y, **kws)
Passed to panel.reset_config
:class:`PlotApp`: a wx.App showing a :class:`PlotFrame`
====================================================================
.. module:: plotapp
A :class:`PlotApp` is a wx.App -- an application -- that consists of a
:class:`PlotFrame`. This show a frame that is decorated with a status bar
and menubar with menu items for saving, printing and configuring plots.
.. class:: PlotApp()
create a plot application. This has methods :meth:`plot`, :meth:`oplot`, and
:meth:`write_message`, which are sent to the underlying :class:`PlotPanel`.
This allows very simple scripts which give plot interactivity and
customization.
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