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/*
Copyright (C) 2010 EPFL (Ecole Polytechnique Fédérale de Lausanne)
Laboratory CNBI (Chair in Non-Invasive Brain-Machine Interface)
Nicolas Bourdaud <nicolas.bourdaud@epfl.ch>
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
/* Example : copy_datafile.c
*
* This program demonstrates how to copy a data file supported by the
* xdffileio library into another file format.
* This shows how to:
* - Read a file
* - Use the events
*/
#include <xdfio.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <errno.h>
#include <unistd.h>
#define NSAMPLE 32
const char filetype_args[XDF_NUM_FILE_TYPES][8] = {
[XDF_ANY] = "same",
[XDF_EDF] = "EDF",
[XDF_BDF] = "BDF",
[XDF_GDF1] = "GDF1",
[XDF_GDF2] = "GDF2"
};
int copy_configuration(struct xdf* dst, struct xdf* src)
{
struct xdfch *dstch, *srcch;
int i, nch, nevtcode, evtcode;
const char* desc;
// Copy header and channels
xdf_copy_conf(dst, src);
nch = 0;
while ((srcch = xdf_get_channel(src, nch++))) {
dstch = xdf_add_channel(dst, NULL);
if (xdf_copy_chconf(dstch, srcch))
return -1;
}
// Copy event code table
xdf_get_conf(src, XDF_F_NEVTTYPE, &nevtcode, XDF_NOF);
for (i=0; i<nevtcode; i++) {
if (xdf_get_evttype(src, i, &evtcode, &desc) < 0
|| xdf_add_evttype(dst, evtcode, desc) < 0)
return -1;
}
return 0;
}
int copy_datastream(struct xdf* dst, struct xdf* src)
{
void* buffer = NULL;
int nch;
ssize_t nssrc, nsdst = 0;
size_t samplesize, stride[1];
xdf_get_conf(src, XDF_F_NCHANNEL, &nch, XDF_NOF);
samplesize = nch*sizeof(double); /* double is the biggest supported type */
buffer = malloc(samplesize*NSAMPLE);
/* Prepare the data transfer */
stride[0] = samplesize;
xdf_define_arrays(src, 1, stride);
xdf_define_arrays(dst, 1, stride);
xdf_prepare_transfer(src);
xdf_prepare_transfer(dst);
/* Data copy loop */
while (1) {
nssrc = xdf_read(src, NSAMPLE, buffer);
if (nssrc <= 0)
break;
nsdst = xdf_write(dst, nssrc, buffer);
if (nsdst < 0)
break;
}
free(buffer);
return (nssrc < 0 || nsdst < 0) ? -1 : 0;
}
int copy_eventtable(struct xdf* dst, struct xdf* src)
{
int nevent, i;
unsigned int evttype;
double onset, duration;
/* Copy the event table */
xdf_get_conf(src, XDF_F_NEVENT, &nevent, XDF_NOF);
for (i=0; i<nevent; i++) {
if (xdf_get_event(src, i, &evttype, &onset, &duration) < 0
|| xdf_add_event(dst, evttype, onset, duration) < 0)
return -1;
}
return 0;
}
int copy_xdf(const char* genfilename, const char* reffilename, int dstfmt)
{
struct xdf *dst = NULL, *src = NULL;
int srcfmt, retcode = -1;
/* Open the source file*/
src = xdf_open(reffilename, XDF_READ, XDF_ANY);
if (src == NULL)
goto exit;
xdf_get_conf(src, XDF_F_FILEFMT, &srcfmt, XDF_NOF);
/* Create the destination file */
if (dstfmt == XDF_ANY)
dstfmt = srcfmt;
dst = xdf_open(genfilename, XDF_WRITE, dstfmt);
if (dst == NULL)
goto exit;
/* Copy the metadata (time, location, channel layout, event types) */
if (copy_configuration(dst, src))
goto exit;
/* Copy channel data */
if (copy_datastream(dst, src))
goto exit;
/* Copy event table */
if (copy_eventtable(dst, src))
goto exit;
retcode = 0;
exit:
xdf_close(src);
xdf_close(dst);
return retcode;
}
int interpret_type(const char* req)
{
int i;
for (i=0; i<XDF_NUM_FILE_TYPES; i++) {
if (strcmp(filetype_args[i], req)==0)
return i;
}
fprintf(stderr,"Unknown filetype,"
" use same filetype than the source\n");
return XDF_ANY;
}
void print_usage(FILE* f, const char* execname)
{
fprintf(f,
"Syntax:\n"
"\t%s [-t filetype] srcfilename dstfilename\n"
"\t%s -h\n"
"The first forms copy srcfilename into dstfilename\n"
"filetype is the file format of the destination and "
"can be one of these types:\n"
"\t\t- same \tuse the same type of the source\n"
"\t\t- EDF \tEuropean Data Format\n"
"\t\t- BDF \tBiosemi Data Format\n"
"\t\t- GDF1 \tGeneral Data Format version 1\n"
"\t\t- GDF2 \tGeneral Data Format version 2\n"
"The second forms displays this help\n",
execname, execname);
}
int main(int argc, char* argv[])
{
int dstfmt, opt, ret;
dstfmt = XDF_ANY;
while((opt = getopt(argc, argv, "t:h")) != -1) {
switch (opt) {
case 't':
dstfmt = interpret_type(optarg);
break;
default:
print_usage(stdout, argv[0]);
return (opt == 'h') ? EXIT_SUCCESS : EXIT_FAILURE;
}
}
if (argc - optind != 2) {
print_usage(stdout, argv[0]);
return EXIT_FAILURE;
}
ret = copy_xdf(argv[optind+1], argv[optind], dstfmt);
return (ret == 0) ? EXIT_SUCCESS : EXIT_FAILURE;
}
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