1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Module Info: This module contains the functionality for compound datatypes
* in the H5T interface.
*/
#define H5T_PACKAGE /*suppress error about including H5Tpkg */
/* Interface initialization */
#define H5_INTERFACE_INIT_FUNC H5T_init_compound_interface
#include "H5private.h" /*generic functions */
#include "H5Eprivate.h" /*error handling */
#include "H5Iprivate.h" /*ID functions */
#include "H5MMprivate.h" /*memory management */
#include "H5Tpkg.h" /*data-type functions */
/* Local macros */
#define H5T_COMPND_INC 64 /*typical max numb of members per struct */
/* Static local functions */
static herr_t H5T_pack(const H5T_t *dt);
/*--------------------------------------------------------------------------
NAME
H5T_init_compound_interface -- Initialize interface-specific information
USAGE
herr_t H5T_init_compound_interface()
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Initializes any interface-specific data or routines. (Just calls
H5T_init_iterface currently).
--------------------------------------------------------------------------*/
static herr_t
H5T_init_compound_interface(void)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5T_init_compound_interface)
FUNC_LEAVE_NOAPI(H5T_init())
} /* H5T_init_compound_interface() */
/*-------------------------------------------------------------------------
* Function: H5Tget_member_offset
*
* Purpose: Returns the byte offset of the beginning of a member with
* respect to the beginning of the compound datatype datum.
*
* Return: Success: Byte offset.
*
* Failure: Zero. Zero is a valid offset, but this
* function will fail only if a call to
* H5Tget_member_dims() fails with the same
* arguments.
*
* Programmer: Robb Matzke
* Wednesday, January 7, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
H5Tget_member_offset(hid_t type_id, unsigned membno)
{
H5T_t *dt = NULL;
size_t ret_value;
FUNC_ENTER_API(H5Tget_member_offset, 0)
H5TRACE2("z","iIu",type_id,membno);
/* Check args */
if (NULL == (dt = H5I_object_verify(type_id,H5I_DATATYPE)) || H5T_COMPOUND != dt->shared->type)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "not a compound datatype")
if (membno >= dt->shared->u.compnd.nmembs)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, 0, "invalid member number")
/* Value */
ret_value = H5T_get_member_offset(dt, membno);
done:
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5T_get_member_offset
*
* Purpose: Private function for H5Tget_member_offset. Returns the byte
* offset of the beginning of a member with respect to the
* beginning of the compound datatype datum.
*
* Return: Success: Byte offset.
*
* Failure: Zero. Zero is a valid offset, but this
* function will fail only if a call to
* H5Tget_member_dims() fails with the same
* arguments.
*
* Programmer: Raymond Lu
* October 8, 2002
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
H5T_get_member_offset(const H5T_t *dt, unsigned membno)
{
size_t ret_value;
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5T_get_member_offset)
assert(dt);
assert(membno < dt->shared->u.compnd.nmembs);
/* Value */
ret_value = dt->shared->u.compnd.memb[membno].offset;
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5Tget_member_class
*
* Purpose: Returns the datatype class of a member of a compound datatype.
*
* Return: Success: Non-negative
*
* Failure: H5T_NO_CLASS
*
* Programmer: Quincey Koziol
* Thursday, November 9, 2000
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
H5T_class_t
H5Tget_member_class(hid_t type_id, unsigned membno)
{
H5T_t *dt = NULL;
H5T_class_t ret_value;
FUNC_ENTER_API(H5Tget_member_class, H5T_NO_CLASS)
H5TRACE2("Tt","iIu",type_id,membno);
/* Check args */
if (NULL == (dt = H5I_object_verify(type_id,H5I_DATATYPE)) || H5T_COMPOUND != dt->shared->type)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5T_NO_CLASS, "not a compound datatype")
if (membno >= dt->shared->u.compnd.nmembs)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5T_NO_CLASS, "invalid member number")
/* Get the type's class. We have to use this function to get type class
* because of the concern of variable-length string. */
ret_value = H5T_get_class(dt->shared->u.compnd.memb[membno].type, FALSE);
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Tget_member_class() */
/*-------------------------------------------------------------------------
* Function: H5Tget_member_type
*
* Purpose: Returns the datatype of the specified member. The caller
* should invoke H5Tclose() to release resources associated with
* the type.
*
* Return: Success: An OID of a copy of the member datatype;
* modifying the returned datatype does not
* modify the member type.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Wednesday, January 7, 1998
*
* Modifications:
*
* Robb Matzke, 4 Jun 1998
* If the member type is a named type then this function returns a
* handle to the re-opened named type.
*
*-------------------------------------------------------------------------
*/
hid_t
H5Tget_member_type(hid_t type_id, unsigned membno)
{
H5T_t *dt = NULL, *memb_dt = NULL;
hid_t ret_value;
FUNC_ENTER_API(H5Tget_member_type, FAIL)
H5TRACE2("i","iIu",type_id,membno);
/* Check args */
if (NULL == (dt = H5I_object_verify(type_id,H5I_DATATYPE)) || H5T_COMPOUND != dt->shared->type)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a compound datatype")
if (membno >= dt->shared->u.compnd.nmembs)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid member number")
if ((memb_dt=H5T_get_member_type(dt, membno))==NULL)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to retrieve member type")
if ((ret_value = H5I_register(H5I_DATATYPE, memb_dt)) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTREGISTER, FAIL, "unable register datatype atom")
done:
if(ret_value<0) {
if(memb_dt!=NULL)
if(H5T_close(memb_dt)<0)
HDONE_ERROR(H5E_DATATYPE, H5E_CANTCLOSEOBJ, FAIL, "can't close datatype")
} /* end if */
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5T_get_member_type
*
* Purpose: Private function for H5Tget_member_type. Returns the data
* type of the specified member.
*
* Return: Success: A copy of the member datatype;
* modifying the returned datatype does not
* modify the member type.
*
* Failure: NULL
*
* Programmer: Raymond Lu
* October 8, 2002
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
H5T_t *
H5T_get_member_type(const H5T_t *dt, unsigned membno)
{
H5T_t *ret_value = NULL;
FUNC_ENTER_NOAPI(H5T_get_member_type, NULL)
assert(dt);
assert(membno < dt->shared->u.compnd.nmembs);
/* Copy datatype into an atom */
if (NULL == (ret_value = H5T_copy(dt->shared->u.compnd.memb[membno].type, H5T_COPY_REOPEN)))
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, NULL, "unable to copy member datatype")
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5T_get_member_size
*
* Purpose: Returns the size of the specified member.
*
* Return: Success: The size in bytes of the member's datatype.
*
* Failure: 0
*
* Programmer: Quincey Koziol
* October 4, 2004
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
H5T_get_member_size(const H5T_t *dt, unsigned membno)
{
size_t ret_value = 0;
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5T_get_member_size)
assert(dt);
assert(membno < dt->shared->u.compnd.nmembs);
/* Value */
ret_value = dt->shared->u.compnd.memb[membno].type->shared->size;
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5Tinsert
*
* Purpose: Adds another member to the compound datatype PARENT_ID. The
* new member has a NAME which must be unique within the
* compound datatype. The OFFSET argument defines the start of
* the member in an instance of the compound datatype, and
* MEMBER_ID is the type of the new member.
*
* Return: Success: Non-negative, the PARENT_ID compound data
* type is modified to include a copy of the
* member type MEMBER_ID.
*
* Failure: Negative
*
* Errors:
*
* Programmer: Robb Matzke
* Monday, December 8, 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5Tinsert(hid_t parent_id, const char *name, size_t offset, hid_t member_id)
{
H5T_t *parent = NULL; /*the compound parent datatype */
H5T_t *member = NULL; /*the atomic member type */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_API(H5Tinsert, FAIL)
H5TRACE4("e","iszi",parent_id,name,offset,member_id);
/* Check args */
if (parent_id==member_id)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "can't insert compound datatype within itself")
if (NULL == (parent = H5I_object_verify(parent_id,H5I_DATATYPE)) || H5T_COMPOUND != parent->shared->type)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a compound datatype")
if (H5T_STATE_TRANSIENT!=parent->shared->state)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "parent type read-only")
if (!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no member name")
if (NULL == (member = H5I_object_verify(member_id,H5I_DATATYPE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype")
/* Insert */
if (H5T_insert(parent, name, offset, member) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINSERT, FAIL, "unable to insert member")
done:
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5Tpack
*
* Purpose: Recursively removes padding from within a compound datatype
* to make it more efficient (space-wise) to store that data.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Wednesday, January 7, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5Tpack(hid_t type_id)
{
H5T_t *dt = NULL;
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_API(H5Tpack, FAIL)
H5TRACE1("e","i",type_id);
/* Check args */
if (NULL == (dt = H5I_object_verify(type_id,H5I_DATATYPE)) || H5T_detect_class(dt,H5T_COMPOUND)<=0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a compound datatype")
/* Pack */
if (H5T_pack(dt) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to pack compound datatype")
done:
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5T_insert
*
* Purpose: Adds a new MEMBER to the compound datatype PARENT. The new
* member will have a NAME that is unique within PARENT and an
* instance of PARENT will have the member begin at byte offset
* OFFSET from the beginning.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, December 8, 1997
*
* Modifications:
* Took out arrayness parameters - QAK, 10/6/00
*
*-------------------------------------------------------------------------
*/
herr_t
H5T_insert(const H5T_t *parent, const char *name, size_t offset, const H5T_t *member)
{
unsigned idx, i;
size_t total_size;
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5T_insert, FAIL)
/* check args */
assert(parent && H5T_COMPOUND == parent->shared->type);
assert(H5T_STATE_TRANSIENT==parent->shared->state);
assert(member);
assert(name && *name);
/* Does NAME already exist in PARENT? */
for (i=0; i<parent->shared->u.compnd.nmembs; i++) {
if (!HDstrcmp(parent->shared->u.compnd.memb[i].name, name))
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINSERT, FAIL, "member name is not unique")
}
/* Does the new member overlap any existing member ? */
total_size=member->shared->size;
for (i=0; i<parent->shared->u.compnd.nmembs; i++) {
if ((offset <= parent->shared->u.compnd.memb[i].offset &&
offset + total_size > parent->shared->u.compnd.memb[i].offset) ||
(parent->shared->u.compnd.memb[i].offset <= offset &&
parent->shared->u.compnd.memb[i].offset +
parent->shared->u.compnd.memb[i].size > offset))
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINSERT, FAIL, "member overlaps with another member")
}
/* Does the new member overlap the end of the compound type? */
if(offset+total_size>parent->shared->size)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINSERT, FAIL, "member extends past end of compound type")
/* Increase member array if necessary */
if (parent->shared->u.compnd.nmembs >= parent->shared->u.compnd.nalloc) {
unsigned na = parent->shared->u.compnd.nalloc + H5T_COMPND_INC;
H5T_cmemb_t *x = H5MM_realloc (parent->shared->u.compnd.memb,
na * sizeof(H5T_cmemb_t));
if (!x)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
parent->shared->u.compnd.nalloc = na;
parent->shared->u.compnd.memb = x;
}
/* Add member to end of member array */
idx = parent->shared->u.compnd.nmembs;
parent->shared->u.compnd.memb[idx].name = H5MM_xstrdup(name);
parent->shared->u.compnd.memb[idx].offset = offset;
parent->shared->u.compnd.memb[idx].size = total_size;
parent->shared->u.compnd.memb[idx].type = H5T_copy (member, H5T_COPY_ALL);
parent->shared->u.compnd.sorted = H5T_SORT_NONE;
parent->shared->u.compnd.nmembs++;
/* Determine if the compound datatype stayed packed */
if(parent->shared->u.compnd.packed) {
/* Check if the member type is packed */
if(H5T_is_packed(parent->shared->u.compnd.memb[idx].type)>0) {
if(idx==0) {
/* If the is the first member, the datatype is not packed
* if the first member isn't at offset 0
*/
if(parent->shared->u.compnd.memb[idx].offset>0)
parent->shared->u.compnd.packed=FALSE;
} /* end if */
else {
/* If the is not the first member, the datatype is not
* packed if the new member isn't adjoining the previous member
*/
if(parent->shared->u.compnd.memb[idx].offset!=(parent->shared->u.compnd.memb[idx-1].offset+parent->shared->u.compnd.memb[idx-1].size))
parent->shared->u.compnd.packed=FALSE;
} /* end else */
} /* end if */
else
parent->shared->u.compnd.packed=FALSE;
} /* end if */
/*
* Set the "force conversion" flag if the field's datatype indicates
*/
if(member->shared->force_conv==TRUE)
parent->shared->force_conv=TRUE;
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5T_pack
*
* Purpose: Recursively packs a compound datatype by removing padding
* bytes. This is done in place (that is, destructively).
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Wednesday, January 7, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5T_pack(const H5T_t *dt)
{
unsigned i;
size_t offset;
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5T_pack)
assert(dt);
if(H5T_detect_class(dt,H5T_COMPOUND)>0) {
/* If datatype has been packed, skip packing it and indicate success */
if(H5T_is_packed(dt)== TRUE)
HGOTO_DONE(SUCCEED)
/* Check for packing unmodifiable datatype */
if (H5T_STATE_TRANSIENT!=dt->shared->state)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "datatype is read-only")
if(dt->shared->parent) {
if (H5T_pack(dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to pack parent of datatype")
/* Adjust size of datatype appropriately */
if(dt->shared->type==H5T_ARRAY)
dt->shared->size = dt->shared->parent->shared->size * dt->shared->u.array.nelem;
else if(dt->shared->type!=H5T_VLEN)
dt->shared->size = dt->shared->parent->shared->size;
} /* end if */
else if(dt->shared->type==H5T_COMPOUND) {
/* Recursively pack the members */
for (i=0; i<dt->shared->u.compnd.nmembs; i++)
if (H5T_pack(dt->shared->u.compnd.memb[i].type) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to pack part of a compound datatype")
/* Remove padding between members */
if(H5T_sort_value(dt, NULL)<0)
HGOTO_ERROR(H5E_INTERNAL, H5E_CANTCOMPARE, FAIL, "value sort failed")
for (i=0, offset=0; i<dt->shared->u.compnd.nmembs; i++) {
dt->shared->u.compnd.memb[i].offset = offset;
offset += dt->shared->u.compnd.memb[i].size;
}
/* Change total size */
dt->shared->size = MAX(1, offset);
/* Mark the type as packed now */
dt->shared->u.compnd.packed=TRUE;
} /* end if */
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5T_is_packed
*
* Purpose: Checks whether a datatype which is compound (or has compound
* components) is packed.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Thursday, September 11, 2003
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
htri_t
H5T_is_packed(const H5T_t *dt)
{
htri_t ret_value=TRUE; /* Return value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5T_is_packed)
assert(dt);
/* Go up the chain as far as possible */
while(dt->shared->parent)
dt=dt->shared->parent;
/* If this is a compound datatype, check if it is packed */
if(dt->shared->type==H5T_COMPOUND)
ret_value=(htri_t)dt->shared->u.compnd.packed;
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5T_is_packed() */
|