File: XdmfHeavyDataController.cpp

package info (click to toggle)
xdmf 3.0%2Bgit20160803-3
  • links: PTS
  • area: main
  • in suites: stretch
  • size: 35,388 kB
  • ctags: 36,627
  • sloc: ansic: 265,382; cpp: 162,889; python: 10,976; f90: 1,378; yacc: 687; fortran: 464; xml: 200; java: 187; lex: 125; makefile: 82; sh: 28
file content (398 lines) | stat: -rw-r--r-- 12,376 bytes parent folder | download | duplicates (9)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
/*****************************************************************************/
/*                                    XDMF                                   */
/*                       eXtensible Data Model and Format                    */
/*                                                                           */
/*  Id : XdmfHeavyDataController.cpp                                         */
/*                                                                           */
/*  Author:                                                                  */
/*     Kenneth Leiter                                                        */
/*     kenneth.leiter@arl.army.mil                                           */
/*     US Army Research Laboratory                                           */
/*     Aberdeen Proving Ground, MD                                           */
/*                                                                           */
/*     Copyright @ 2011 US Army Research Laboratory                          */
/*     All Rights Reserved                                                   */
/*     See Copyright.txt for details                                         */
/*                                                                           */
/*     This software is distributed WITHOUT ANY WARRANTY; without            */
/*     even the implied warranty of MERCHANTABILITY or FITNESS               */
/*     FOR A PARTICULAR PURPOSE.  See the above copyright notice             */
/*     for more information.                                                 */
/*                                                                           */
/*****************************************************************************/

#include <functional>
#include <numeric>
#include "string.h"
#include "XdmfArrayType.hpp"
#include "XdmfError.hpp"
#include "XdmfHeavyDataController.hpp"
#include "XdmfSystemUtils.hpp"

XdmfHeavyDataController::XdmfHeavyDataController(const std::string & filePath,
                                                 const shared_ptr<const XdmfArrayType> & type,
                                                 const std::vector<unsigned int> & starts,
                                                 const std::vector<unsigned int> & strides,
                                                 const std::vector<unsigned int> & dimensions,
                                                 const std::vector<unsigned int> & dataspaces) :
  mStart(starts),
  mStride(strides),
  mDimensions(dimensions),
  mDataspaceDimensions(dataspaces),
  mFilePath(filePath),
  mArrayStartOffset(0),
  mType(type)
{
}

XdmfHeavyDataController::XdmfHeavyDataController(const XdmfHeavyDataController& refController):
  mStart(refController.getStart()),
  mStride(refController.getStride()),
  mDimensions(refController.getDimensions()),
  mDataspaceDimensions(refController.getDataspaceDimensions()),
  mFilePath(refController.getFilePath()),
  mArrayStartOffset(refController.getArrayOffset()),
  mType(refController.getType())
{
}

XdmfHeavyDataController::~XdmfHeavyDataController()
{
}

unsigned int
XdmfHeavyDataController::getArrayOffset() const
{
  return mArrayStartOffset;
}

std::string
XdmfHeavyDataController::getDataspaceDescription() const
{
  std::stringstream dimensionStream;

  for (unsigned int j = 0; j < this->getStart().size(); ++j) {
    dimensionStream << this->getStart()[j];
    if (j < this->getStart().size() - 1) {
      dimensionStream << " ";
    }
  }
  dimensionStream << ":";
  for (unsigned int j = 0; j < this->getStride().size(); ++j) {
    dimensionStream << this->getStride()[j];
    if (j < this->getStride().size() - 1) {
      dimensionStream << " ";
    }
  }
  dimensionStream << ":";
  for (unsigned int j = 0; j < this->getDimensions().size(); ++j) {
    dimensionStream << this->getDimensions()[j];
    if (j < this->getDimensions().size() - 1) {
      dimensionStream << " ";
    }
  }
  dimensionStream << ":";
  for (unsigned int j = 0; j < this->getDataspaceDimensions().size(); ++j) {
    dimensionStream << this->getDataspaceDimensions()[j];
    if (j < this->getDataspaceDimensions().size() - 1) {
      dimensionStream << " ";
    }
  }
  return dimensionStream.str();
}

std::vector<unsigned int>
XdmfHeavyDataController::getDataspaceDimensions() const
{
  return mDataspaceDimensions;
}

unsigned int
XdmfHeavyDataController::getDataspaceSize() const
{
  return std::accumulate(mDataspaceDimensions.begin(),
                         mDataspaceDimensions.end(),
                         1,
                         std::multiplies<unsigned int>());
}

std::string
XdmfHeavyDataController::getDescriptor() const
{
  return "";
}

std::vector<unsigned int> 
XdmfHeavyDataController::getDimensions() const
{
  return mDimensions;
}

std::string
XdmfHeavyDataController::getFilePath() const
{
  return mFilePath;
}

std::vector<unsigned int>
XdmfHeavyDataController::getStart() const
{
  return mStart;
}

std::vector<unsigned int>
XdmfHeavyDataController::getStride() const
{
  return mStride;
}

unsigned int
XdmfHeavyDataController::getSize() const
{
  return std::accumulate(mDimensions.begin(),
                         mDimensions.end(),
                         1,
                         std::multiplies<unsigned int>());
}

shared_ptr<const XdmfArrayType>
XdmfHeavyDataController::getType() const
{
  return mType;
}

void
XdmfHeavyDataController::setArrayOffset(unsigned int newOffset)
{
  mArrayStartOffset = newOffset;
}

// C Wrappers

void XdmfHeavyDataControllerFree(XDMFHEAVYDATACONTROLLER * item)
{
  if (item != NULL) {
    delete ((XdmfHeavyDataController *)item);
    item = NULL;
  }
}

unsigned int * XdmfHeavyDataControllerGetDataspaceDimensions(XDMFHEAVYDATACONTROLLER * controller)
{
  try
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getDataspaceDimensions();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
  catch (...)
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getDataspaceDimensions();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
}

unsigned int * XdmfHeavyDataControllerGetDimensions(XDMFHEAVYDATACONTROLLER * controller)
{
  try
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getDimensions();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
  catch (...)
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getDimensions();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
}

char * XdmfHeavyDataControllerGetFilePath(XDMFHEAVYDATACONTROLLER * controller)
{
  try
  {
    char * returnPointer = strdup(((XdmfHeavyDataController *)(controller))->getFilePath().c_str());
    return returnPointer;
  }
  catch (...)
  {
    char * returnPointer = strdup(((XdmfHeavyDataController *)(controller))->getFilePath().c_str());
    return returnPointer;
  }
}

char * XdmfHeavyDataControllerGetName(XDMFHEAVYDATACONTROLLER * controller)
{
  try
  {
    char * returnPointer = strdup(((XdmfHeavyDataController *)(controller))->getName().c_str());
    return returnPointer;
  }
  catch (...)
  {
    char * returnPointer = strdup(((XdmfHeavyDataController *)(controller))->getName().c_str());
    return returnPointer;
  }
}

unsigned int XdmfHeavyDataControllerGetNumberDimensions(XDMFHEAVYDATACONTROLLER * controller)
{
  return ((XdmfHeavyDataController *)(controller))->getDimensions().size();
}

unsigned int XdmfHeavyDataControllerGetSize(XDMFHEAVYDATACONTROLLER * controller)
{
  return ((XdmfHeavyDataController *)(controller))->getSize();
}

unsigned int * XdmfHeavyDataControllerGetStart(XDMFHEAVYDATACONTROLLER * controller)
{
  try
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getStart();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
  catch (...)
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getStart();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
}

unsigned int * XdmfHeavyDataControllerGetStride(XDMFHEAVYDATACONTROLLER * controller)
{
  try
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getStride();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
  catch (...)
  {
    std::vector<unsigned int> tempVector = ((XdmfHeavyDataController *)(controller))->getStride();
    unsigned int returnSize = tempVector.size();
    unsigned int * returnArray = new unsigned int[returnSize]();
    for (unsigned int i = 0; i < returnSize; ++i) {
      returnArray[i] = tempVector[i];
    }
    return returnArray;
  }
}

void XdmfHeavyDataControllerSetArrayOffset(XDMFHEAVYDATACONTROLLER * controller, unsigned int newOffset)
{
  ((XdmfHeavyDataController *)(controller))->setArrayOffset(newOffset);
}

unsigned int XdmfHeavyDataControllerGetArrayOffset(XDMFHEAVYDATACONTROLLER * controller)
{
  return ((XdmfHeavyDataController *)(controller))->getArrayOffset();
}

int XdmfHeavyDataControllerGetType(XDMFHEAVYDATACONTROLLER * controller, int * status)
{
  XDMF_ERROR_WRAP_START(status)
  shared_ptr<const XdmfArrayType> compareType = ((XdmfHeavyDataController *)(controller))->getType();
  std::string typeName = compareType->getName();
  unsigned int typePrecision = compareType->getElementSize();
  if (typeName == XdmfArrayType::UInt8()->getName())
  {
      return XDMF_ARRAY_TYPE_UINT8;
  }
  else if (typeName == XdmfArrayType::UInt16()->getName())
  {
      return XDMF_ARRAY_TYPE_UINT16;
  }
  else if (typeName == XdmfArrayType::UInt32()->getName())
  {
      return XDMF_ARRAY_TYPE_UINT32;
  }
  else if (typeName == XdmfArrayType::Int8()->getName())
  {
      return XDMF_ARRAY_TYPE_INT8;
  }
  else if (typeName == XdmfArrayType::Int16()->getName())
  {
      return XDMF_ARRAY_TYPE_INT16;
  }
  else if (typeName == XdmfArrayType::Int32()->getName() || typeName == XdmfArrayType::Int64()->getName())
  {
    if (typePrecision == 4)
    {
      return XDMF_ARRAY_TYPE_INT32;
    }
    else if (typePrecision == 8)
    {
      return XDMF_ARRAY_TYPE_INT64;
    }
    else
    {
    }
  }
  else if (typeName == XdmfArrayType::Float32()->getName() || typeName == XdmfArrayType::Float64()->getName())
  {
    if (typePrecision == 4)
    {
      return XDMF_ARRAY_TYPE_FLOAT32;
    }
    else if (typePrecision == 8)
    {
      return XDMF_ARRAY_TYPE_FLOAT64;
    }
    else
    {
    }
  }
  else if (typeName == XdmfArrayType::String()->getName())
  {
    //This shouldn't be used from C bindings
    XdmfError::message(XdmfError::FATAL,
                       "Error: String type not usable from C.");
  }
  else
  {
    XdmfError::message(XdmfError::FATAL,
                       "Error: Invalid ArrayType.");
  }
  XDMF_ERROR_WRAP_END(status)
  return -1;
}

void XdmfHeavyDataControllerRead(XDMFHEAVYDATACONTROLLER * controller, void * array, int * status)
{
  XDMF_ERROR_WRAP_START(status)
  ((XdmfHeavyDataController *)(controller))->read((XdmfArray *)array);
  XDMF_ERROR_WRAP_END(status)
}