File: core.py

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# encoding: utf-8
# 2009 © Václav Šmilauer <eudoxos@arcig.cz>
"""
Core functionality (Scene in c++), such as accessing bodies, materials, interactions. Specific functionality tests should go to engines.py or elsewhere, not here.
"""
import unittest
import random
from yade.wrapper import *
from yade._customConverters import *
from yade import utils
from yade import *
from math import *
from yade.minieigenHP import *
import yade.config


## TODO tests
class TestForce(unittest.TestCase):
	pass


class TestTags(unittest.TestCase):
	pass


class TestInteractions(unittest.TestCase):

	def setUp(self):
		O.reset()

	def testEraseBodiesInInteraction(self):
		O.reset()
		id1 = O.bodies.append(utils.sphere([0.5, 0.5, 0.0 + 0.095], .1))
		id2 = O.bodies.append(utils.sphere([0.5, 0.5, 0.0 + 0.250], .1))
		O.engines = [
		        ForceResetter(),
		        InsertionSortCollider([Bo1_Sphere_Aabb()]),
		        InteractionLoop(
		                [Ig2_Sphere_Sphere_L3Geom()],  #
		                [Ip2_FrictMat_FrictMat_FrictPhys()],
		                [Law2_L3Geom_FrictPhys_ElPerfPl()]
		        ),
		        NewtonIntegrator(damping=0.1, gravity=(0, 0, -9.81))
		]
		O.dt = .5e-4 * utils.PWaveTimeStep()
		O.step()
		O.bodies.erase(id1)
		O.step()


class TestLoop(unittest.TestCase):

	def setUp(self):
		O.reset()

	def testSubstepping(self):
		'Loop: substepping'
		O.engines = [ForceResetter(), PyRunner(initRun=True, iterPeriod=1, command='pass')]
		# value outside the loop
		self.assertTrue(O.subStep == -1)
		# O.subStep is meaningful when substepping
		O.subStepping = True
		O.step()
		self.assertTrue(O.subStep == 0)
		O.step()
		self.assertTrue(O.subStep == 1)
		# when substepping is turned off in the middle of the loop, the next step finishes the loop
		O.subStepping = False
		O.step()
		self.assertTrue(O.subStep == -1)
		# subStep==0 inside the loop without substepping
		O.engines = [
		        PyRunner(
		                initRun=True,
		                iterPeriod=1,
		                command='if O.subStep!=0: raise RuntimeError("O.subStep!=0 inside the loop with O.subStepping==False!")'
		        )
		]
		O.step()

	def testEnginesModificationInsideLoop(self):
		'Loop: O.engines can be modified inside the loop transparently.'
		O.engines = [
		        PyRunner(initRun=True, iterPeriod=1,
		                 command='from yade import *; O.engines=[ForceResetter(),GravityEngine(),NewtonIntegrator()]'),  # change engines here
		        ForceResetter()  # useless engine
		]
		O.subStepping = True
		# run prologue and the first engine, which modifies O.engines
		O.step()
		O.step()
		self.assertTrue(O.subStep == 1)
		self.assertTrue(len(O.engines) == 3)  # gives modified engine sequence transparently
		self.assertTrue(len(O._nextEngines) == 3)
		self.assertTrue(len(O._currEngines) == 2)
		O.step()
		O.step()
		# run the 2nd ForceResetter, and epilogue
		self.assertTrue(O.subStep == -1)
		# start the next step, nextEngines should replace engines automatically
		O.step()
		self.assertTrue(O.subStep == 0)
		self.assertTrue(len(O._nextEngines) == 0)
		self.assertTrue(len(O.engines) == 3)
		self.assertTrue(len(O._currEngines) == 3)

	def testDead(self):
		'Loop: dead engines are not run'
		O.engines = [PyRunner(dead=True, initRun=True, iterPeriod=1, command='pass')]
		O.step()
		self.assertTrue(O.engines[0].nDone == 0)


class TestIO(unittest.TestCase):

	def testSaveAllClasses(self):
		'I/O: All classes can be saved and loaded with boost::serialization'
		import yade.system
		failed = set()
		for c in yade.system.childClasses('Serializable'):
			O.reset()
			try:
				O.miscParams = [eval(c)()]
				O.saveTmp(quiet=True)
				O.loadTmp(quiet=True)
			except (RuntimeError, ValueError):
				failed.add(c)
		failed = list(failed)
		failed.sort()
		self.assertTrue(len(failed) == 0, 'Failed classes were: ' + ' '.join(failed))


class TestMaterialStateAssociativity(unittest.TestCase):

	def setUp(self):
		O.reset()

	def testThrowsAtBadCombination(self):
		"Material+State: throws when body has material and state that don't work together."
		b = Body()
		b.mat = CpmMat()
		b.state = State()  #should be CpmState()
		O.bodies.append(b)
		self.assertRaises(RuntimeError, lambda: O.step())  # throws runtime_error

	def testThrowsAtNullState(self):
		"Material+State: throws when body has material but NULL state."
		b = Body()
		b.mat = Material()
		b.state = None  # → shared_ptr<State>() by boost::python
		O.bodies.append(b)
		self.assertRaises(RuntimeError, lambda: O.step())

	def testMaterialReturnsState(self):
		"Material+State: CpmMat returns CpmState when asked for newAssocState"
		self.assertTrue(CpmMat().newAssocState().__class__ == CpmState)


class TestBodies(unittest.TestCase):

	def setUp(self):
		O.reset()
		self.count = 100
		O.bodies.append([utils.sphere([random.random(), random.random(), random.random()], random.random()) for i in range(0, self.count)])
		random.seed()

	def testIterate(self):
		"Bodies: Iteration"
		counted = 0
		for b in O.bodies:
			counted += 1
		self.assertTrue(counted == self.count)

	def testLen(self):
		"Bodies: len(O.bodies)"
		self.assertTrue(len(O.bodies) == self.count)

	def testErase(self):
		"Bodies: erased bodies are None in python"
		O.bodies.erase(0)
		self.assertTrue(O.bodies[0] == None)

	def testNegativeIndex(self):
		"Bodies: Negative index counts backwards (like python sequences)."
		self.assertTrue(O.bodies[-1] == O.bodies[self.count - 1])

	def testErasedIterate(self):
		"Bodies: Iterator silently skips erased ones"
		removed, counted = 0, 0
		for i in range(0, 10):
			id = random.randint(0, self.count - 1)
			if O.bodies[id]:
				O.bodies.erase(id)
				removed += 1
		for b in O.bodies:
			counted += 1
		self.assertTrue(counted == self.count - removed)

	def testErasedAndNewlyCreatedSphere(self):
		"Bodies: The bug is described in LP:1001194. If the new body was created after deletion of previous, it has no bounding box"
		O.reset()
		id1 = O.bodies.append(utils.sphere([0.0, 0.0, 0.0], 0.5))
		id2 = O.bodies.append(utils.sphere([0.0, 2.0, 0.0], 0.5))
		O.engines = [
		        ForceResetter(),
		        InsertionSortCollider([Bo1_Sphere_Aabb()]),
		        InteractionLoop([Ig2_Sphere_Sphere_L3Geom()], [Ip2_FrictMat_FrictMat_FrictPhys()], [Law2_L3Geom_FrictPhys_ElPerfPl()]),
		        NewtonIntegrator(damping=0.1, gravity=(0, 0, -9.81))
		]
		O.dt = .5e-4 * utils.PWaveTimeStep()
		#Before first step the bodies should not have bounds
		self.assertTrue(O.bodies[id1].bound == None and O.bodies[id2].bound == None)
		O.run(1, True)
		#After first step the bodies should have bounds
		self.assertTrue(O.bodies[id1].bound != None and O.bodies[id2].bound != None)
		#Add 3rd body
		id3 = O.bodies.append(utils.sphere([0.0, 4.0, 0.0], 0.5))
		O.run(1, True)
		self.assertTrue(O.bodies[id1].bound != None and O.bodies[id2].bound != None and O.bodies[id3].bound != None)
		#Remove 3rd body
		O.bodies.erase(id3)
		O.run(1, True)
		#Add 4th body
		id4 = O.bodies.append(utils.sphere([0.0, 6.0, 0.0], 0.5))
		O.run(1, True)
		self.assertTrue(O.bodies[id1].bound != None and O.bodies[id2].bound != None and O.bodies[id4].bound != None)


class TestMaterials(unittest.TestCase):

	def setUp(self):
		# common setup for all tests in this class
		O.reset()
		O.materials.append([FrictMat(young=1, label='materialZero'), ElastMat(young=100, label='materialOne')])
		O.bodies.append([utils.sphere([0, 0, 0], .5, material=0), utils.sphere([1, 1, 1], .5, material=0), utils.sphere([1, 1, 1], .5, material=1)])

	def testShared(self):
		"Material: shared_ptr's makes change in material immediate everywhere"
		O.bodies[0].mat.young = 23423333
		self.assertTrue(O.bodies[0].mat.young == O.bodies[1].mat.young)

	def testSharedAfterReload(self):
		"Material: shared_ptr's are preserved when saving/loading"
		O.saveTmp(quiet=True)
		O.loadTmp(quiet=True)
		O.bodies[0].mat.young = 9087438484
		self.assertTrue(O.bodies[0].mat.young == O.bodies[1].mat.young)

	def testLen(self):
		"Material: len(O.materials)"
		self.assertTrue(len(O.materials) == 2)

	def testNegativeIndex(self):
		"Material: negative index counts backwards."
		self.assertTrue(O.materials[-1] == O.materials[1])

	def testIterate(self):
		"Material: iteration over O.materials"
		counted = 0
		for m in O.materials:
			counted += 1
		self.assertTrue(counted == len(O.materials))

	def testAccess(self):
		"Material: find by index or label; KeyError raised for invalid label."
		self.assertRaises(KeyError, lambda: O.materials['nonexistent label'])
		self.assertTrue(O.materials['materialZero'] == O.materials[0])


class TestMatchMaker(unittest.TestCase):

	def setUp(self):
		O.reset()

	def testMatchMakerCollisions(self):
		fr = 0.5
		rho = 2000
		tc = 0.001
		en = 0.5
		et = 0.5
		mat1 = O.materials.append(ViscElMat(frictionAngle=fr, tc=tc, en=en, et=et, density=rho))
		mat2 = O.materials.append(ViscElMat(frictionAngle=fr, tc=tc, en=en, et=et, density=rho))
		mat3 = O.materials.append(ViscElMat(frictionAngle=fr, tc=tc, en=en, et=et, density=rho))
		r1 = 0.002381
		r2 = 0.002381
		id11 = O.bodies.append(utils.sphere(center=[0, 0, 0], radius=r1, material=mat1, fixed=True, color=[0, 0, 1]))
		id12 = O.bodies.append(utils.sphere(center=[0, 0, (r1 + r2)], radius=r2, material=mat2, fixed=False, color=[0, 0, 1]))

		id21 = O.bodies.append(utils.sphere(center=[3 * r1, 0, 0], radius=r1, material=mat1, fixed=True, color=[0, 1, 0]))
		id22 = O.bodies.append(utils.sphere(center=[3 * r1, 0, (r1 + r2)], radius=r2, material=mat3, fixed=False, color=[0, 1, 0]))

		id31 = O.bodies.append(utils.sphere(center=[6 * r1, 0, 0], radius=r1, material=mat2, fixed=True, color=[1, 0, 0]))
		id32 = O.bodies.append(utils.sphere(center=[6 * r1, 0, (r1 + r2)], radius=r2, material=mat3, fixed=False, color=[1, 0, 0]))

		O.engines = [
		        ForceResetter(),
		        InsertionSortCollider([Bo1_Sphere_Aabb()], verletDist=r1 * 10.0),
		        InteractionLoop(
		                [Ig2_Sphere_Sphere_ScGeom()],
		                [
		                        Ip2_ViscElMat_ViscElMat_ViscElPhys(
		                                en=MatchMaker(matches=((mat1, mat2, .1), (mat1, mat3, .2), (mat2, mat3, .4))),
		                                et=MatchMaker(matches=((mat1, mat2, .7), (mat1, mat3, .8), (mat2, mat3, .9))),
		                                frictAngle=MatchMaker(matches=((mat1, mat2, .1), (mat1, mat3, .2), (mat2, mat3, .3)))
		                        )
		                ],
		                [Law2_ScGeom_ViscElPhys_Basic()],
		        ),
		        NewtonIntegrator(damping=0, gravity=[0, 0, -9.81]),
		]

		O.step()
		if (not O.interactions[id11, id12].phys):
			O.step()
		if (not O.interactions[id11, id12].phys):
			O.step()
		if (not O.interactions[id11, id12].phys):
			try:
				test = O.interactions[id11, id12].phys.tangensOfFrictionAngle
			except Exception as e:
				if (str(e) == "'NoneType' object has no attribute 'tangensOfFrictionAngle'"):
					print(
					        ("=" * 80) + "\n" + str(e) +
					        "\nThis error should be extremely rare. And is ignored until further investigation, see https://gitlab.com/yade-dev/trunk/-/issues/183\n"
					        + ("=" * 80)
					)
					return
				else:
					raise e
		self.assertTrue((atan(O.interactions[id11, id12].phys.tangensOfFrictionAngle) - 0.1) == 0)
		if (yade.math.needsMpmathAtN(1)):
			# looks like with high precision there are some dangling bits at the end
			self.assertAlmostEqual(atan(O.interactions[id21, id22].phys.tangensOfFrictionAngle), 0.2)
		else:
			self.assertTrue((atan(O.interactions[id21, id22].phys.tangensOfFrictionAngle) - 0.2) == 0)
		self.assertTrue((atan(O.interactions[id31, id32].phys.tangensOfFrictionAngle) - 0.3) == 0)

		# Use Real("…") to construct the numbers to ensure we have full precision.
		self.assertTrue(round(O.interactions[id11, id12].phys.cn, 3) - Real("0.26") == 0)
		self.assertTrue(round(O.interactions[id21, id22].phys.cn, 3) - Real("0.182") == 0)
		self.assertTrue(round(O.interactions[id31, id32].phys.cn, 3) - Real("0.104") == 0)

		self.assertTrue(round(O.interactions[id11, id12].phys.cs, 3) - Real("0.012") == 0)
		self.assertTrue(round(O.interactions[id21, id22].phys.cs, 3) - Real("0.007") == 0)
		self.assertTrue(round(O.interactions[id31, id32].phys.cs, 3) - Real("0.003") == 0)


class TestPyRunner(unittest.TestCase):

	def setUp(self):
		O.reset()

	def testMissingFunction(self):
		print("\n\n"+'\033[92m'+"*** Note: the following is testing that throwing exceptions from PyRunner works correctly. In here, lack of exception thrown is an error. Exception is expected in this test!! ***"+'\033[0m')
		O.engines += [PyRunner(command='missingFunction()', iterPeriod=1)]
		self.assertRaises(RuntimeError, lambda: O.run(5, True))
		try:
			O.run(5, True)
		except RuntimeError as e:
			self.assertEqual(
			        str(e), """PyRunner error.

COMMAND: 'missingFunction()'

ERROR:
name 'missingFunction' is not defined

STACK TRACE:
Traceback (most recent call last):

  File "<string>", line 1, in <module>

NameError: name 'missingFunction' is not defined
"""
			)

	def testRaisingFunction(self):
		print("\n\n"+'\033[92m'+"*** Note: the following is testing that throwing exceptions from PyRunner works correctly. In here, lack of exception thrown is an error. Exception is expected in this test!! ***"+'\033[0m')
		O.engines += [PyRunner(command='raise RuntimeError("raised RuntimeError")', iterPeriod=1)]
		self.assertRaises(RuntimeError, lambda: O.run(5, True))
		try:
			O.run(5, True)
		except RuntimeError as e:
			self.assertEqual(
			        str(e), """PyRunner error.

COMMAND: 'raise RuntimeError("raised RuntimeError")'

ERROR:
raised RuntimeError

STACK TRACE:
Traceback (most recent call last):

  File "<string>", line 1, in <module>

RuntimeError: raised RuntimeError
"""
			)

	def testPythonToCppToPythonThrow(self):
		print("\n\n"+'\033[92m'+"*** Note: the following is testing that throwing exceptions from PyRunner works correctly. In here, lack of exception thrown is an error. Exception is expected in this test!! ***"+'\033[0m')
		# NOTE: if we used 'spheresInCell=50' argument, then we could also trigger "Unable to shrink cell due to maximum body size ……" exception. But only if switchScene wasn't throwing earlier.
		O.engines += [
		        PyRunner(
		                command=
		                "from yade import pack;pred=pack.inHyperboloid(centerBottom=(0,0,-.1),centerTop=(0,0,.1),radius=.05,skirt=.03);pack.randomDensePack(pred,spheresInCell=100,radius=8e-2)",
		                iterPeriod=1
		        )
		]
		self.assertRaises(RuntimeError, lambda: O.run(5, True))
		try:
			O.run(5, True)
		except RuntimeError as e:
			self.assertEqual(
			        str(e)[0:253], """PyRunner error.

COMMAND: 'from yade import pack;pred=pack.inHyperboloid(centerBottom=(0,0,-.1),centerTop=(0,0,.1),radius=.05,skirt=.03);pack.randomDensePack(pred,spheresInCell=100,radius=8e-2)'

ERROR:
Please stop the simulation first, e.g. O.pause().
"""
			)