Package: nipype / 1.9.2-4

Metadata

Package Version Patches format
nipype 1.9.2-4 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
deb_skip_doctest_pybids | (download)

nipype/interfaces/io.py | 14 7 + 7 - 0 !
1 file changed, 7 insertions(+), 7 deletions(-)

 skip doctest pybids


deb_no_explicit_pydot | (download)

nipype/info.py | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 skip pydot version test


deb_disable_google_online_snippets | (download)

doc/_templates/gse.html | 3 3 + 0 - 0 !
doc/_templates/layout.html | 19 6 + 13 - 0 !
doc/_templates/navbar.html | 1 0 + 1 - 0 !
doc/_templates/sidebar_versions.html | 7 0 + 7 - 0 !
doc/searchresults.rst | 3 3 + 0 - 0 !
5 files changed, 12 insertions(+), 21 deletions(-)

 disable google online snippets


python3.patch | (download)

Makefile | 2 1 + 1 - 0 !
nipype/__init__.py | 2 1 + 1 - 0 !
tools/gitwash_dumper.py | 2 1 + 1 - 0 !
3 files changed, 3 insertions(+), 3 deletions(-)

 force usage of python3


sphinx.patch | (download)

doc/conf.py | 33 19 + 14 - 0 !
doc/requirements.txt | 2 0 + 2 - 0 !
2 files changed, 19 insertions(+), 16 deletions(-)

 get sphinx doc somehow building


fix transpose.patch | (download)

nipype/algorithms/tests/test_CompCor.py | 1 1 + 0 - 0 !
1 file changed, 1 insertion(+)

 declare a,b in tests as np arrays explicitly
reproducible build.patch | (download)

nipype/algorithms/misc.py | 2 1 + 1 - 0 !
nipype/algorithms/tests/test_auto_ModifyAffine.py | 2 1 + 1 - 0 !
nipype/sphinxext/gh.py | 2 1 + 1 - 0 !
3 files changed, 3 insertions(+), 3 deletions(-)

 make build reproducible
 This patch replaces local file links with remote url in the sphinx generated documentation.
 Also disables printing object id in the generated doc.
fix privacy breaches.patch | (download)

README.rst | 35 0 + 35 - 0 !
doc/_templates/indexsidebar.html | 6 3 + 3 - 0 !
doc/_templates/layout.html | 6 0 + 6 - 0 !
nipype/pipeline/engine/report_template.html | 2 1 + 1 - 0 !
4 files changed, 4 insertions(+), 45 deletions(-)

 fix privacy breaches caused by autoloaded links.
 There are a bunch of links landing in the html documentation which end up
 automatically loaded upon mere reading of the local-only document.  This
 concerns images, scripts and stylesheets, among other things.  These are
 problematic for two reasons:
  * they break when offline, or when the remote resource disappears;
  * they reveal the remote resource someone is reading the documentation at a
    given time.
 .
 Note that there are still some leftover links which still need to be
 addressed, but I failed to identify where they stem from (basically this
 concerns a bunch of scripts which are loaded from cloudflare, and also some
 TeX html-ized resources).
sphinx_8.2.1.patch | (download)

nipype/sphinxext/apidoc/__init__.py | 36 27 + 9 - 0 !
1 file changed, 27 insertions(+), 9 deletions(-)

 allow nipype.sphinx.ext.apidoc config to work with sphinx 8.2.1+