doc/conf.py | 3 1 + 2 - 0 !
1 file changed, 1 insertion(+), 2 deletions(-)

 use default sphinx theme for documentation
 The upstream's original theme includes their corporate
 logo. To be safe, this patch ignores it and configures
 the documentation builder to use the default theme.

setup.cfg | 3 3 + 0 - 0 !
setup.py | 1 1 + 0 - 0 !
2 files changed, 4 insertions(+)

 modify setuptools configuration to use nosetests
 Configure nose setuptools configuration as described in
 https://nose.readthedocs.org/en/latest/setuptools_integration.html
 and the manpage for the executable

pbcore/io/dataset/pyxb/DataSetXsd.py | 6 3 + 3 - 0 !
pbcore/io/dataset/pyxb/_pbbase.py | 6 3 + 3 - 0 !
pbcore/io/dataset/pyxb/_pbmeta.py | 6 3 + 3 - 0 !
pbcore/io/dataset/pyxb/_pbrk.py | 6 3 + 3 - 0 !
pbcore/io/dataset/pyxb/_pbsample.py | 6 3 + 3 - 0 !
requirements-dev.txt | 2 1 + 1 - 0 !
6 files changed, 16 insertions(+), 16 deletions(-)

 ignore hard-coded pyxb version check
 Upstream does not really care to keep up with pyxb versions
 (see https://github.com/PacificBiosciences/pbcore/pull/105/commits/2b2782e68a0117e0844279a001a010376e18b644)
 Dataset is not an interesting part of pbcore either. Disabling the hardcoded
 version check, the test suite still passes.

requirements-dev.txt | 3 1 + 2 - 0 !
tests/test_pbdataset.py | 2 1 + 1 - 0 !
2 files changed, 2 insertions(+), 3 deletions(-)

 relax test constraint which is rather a rounding issue
 Traceback (most recent call last):
   File "/build/python-pbcore-1.4.2+dfsg/tests/test_pbdataset.py", line 2125, in test_stats_metadata
     2322.16060475)
 AssertionError: 2322.1606047549185 != 2322.16060475

requirements-dev.txt | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 relax version condition and accept debian packaged pylint

tests/test_pbdataset_metadata.py | 12 0 + 12 - 0 !
1 file changed, 12 deletions(-)

 missing data for this test

pbcore/io/BasH5IO.py | 5 4 + 1 - 0 !
1 file changed, 4 insertions(+), 1 deletion(-)

 [patch] fixes for numpy 1.16

Fixes #120