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#Please insert up references in the next lines (line starts with keyword UP)
UP arb.hlp
UP glossary.hlp
UP arb_edit4.hlp
UP extended.hlp
#Please insert subtopic references (line starts with keyword SUB)
#SUB subtopic.hlp
# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}
#************* Title of helpfile !! and start of real helpfile ********
TITLE E. coli Reference
OCCURRENCE ARB_EDIT4/Edit/Reload Ecoli sequence
DESCRIPTION The SAI entry 'ECOLI' is used by the editor and other
programs to detect and display the current cursor position
with respect to the homologous position within the
E. coli sequence.
If you have no SAI 'ECOLI' yet this creates one:
* Search your ecoli sequence and select it.
* Go to species information window and
* press SPECIES/COPY to create a copy of the selected species
This will create a species with ID 'xxx0' or similar, where 'xxx' is
the ID of your selected species.
* select the 'name' field and change it to 'ECOLI'
* press 'SPECIES/Convert to SAI'
NOTES After inserting or deleting gaps in the whole alignment (ARB_NT/
Sequence/Insert/Delete column) the reference SAI has to be
reloaded by this function.
You may as well choose any other sequence as reference sequence.
See LINK{ed4_nds.hlp} to change the default name 'Ecoli'.
BUGS No bugs known
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