1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
|
#Please insert up references in the next lines (line starts with keyword UP)
UP arb.hlp
UP glossary.hlp
UP pa_quick.hlp
UP pa_add.hlp
#Please insert subtopic references (line starts with keyword SUB)
SUB partial_sequences.hlp
# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}
#************* Title of helpfile !! and start of real helpfile ********
TITLE Add marked partial species
OCCURRENCE ARB_PARRSIMONY/Tree/Add species to tree
DESCRIPTION Use this to add partial sequences into an existing tree.
NOTES The branchlengths of the added partial sequences represent the
number of mutations against the full sequence.
Adding species using this function marks them as "partial sequence" if
they have no 'ARB_partial' entry yet. Otherwise insertion is aborted.
All species already in tree are marked as "full sequence" if
they have no 'ARB_partial' entry yet.
EXAMPLES None
WARNINGS Calculating branch length after adding partial sequences
will lead to wrong lengths.
BUGS No bugs known
|
