File: annotate16.out

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##fileformat=VCFv4.1
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##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
##INFO=<ID=FLAG,Number=0,Type=Flag,Description="Test type">
##INFO=<ID=IINT,Number=1,Type=Integer,Description="Test type">
##INFO=<ID=IFLT,Number=1,Type=Float,Description="Test type">
##INFO=<ID=ISTR,Number=1,Type=String,Description="Test type">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=FINT,Number=1,Type=Integer,Description="Test type">
##FORMAT=<ID=FFLT,Number=1,Type=Float,Description="Test type">
##FORMAT=<ID=FSTR,Number=1,Type=String,Description="Test type">
##FILTER=<ID=q11,Description="Quality below 10">
##FORMAT=<ID=newGT,Number=1,Type=String,Description="Genotype">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A	B	C
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1	3000002	.	C	T	.	.	.	GT:newGT	.:0|1	.:1|1	.:.
1	3000003	xx	C	T	11	q11	FLAG;IINT=.;IFLT=.;ISTR=.	GT:FINT:FFLT:FSTR:newGT	0/0:.:.:.:0|1	0/0:.:.:.:1|1	0/0:.:.:.:.
1	3000004	xx	C	T	11	q11	FLAG;IINT=11;IFLT=1.1;ISTR=xxx	GT:FINT:FFLT:FSTR:newGT	0/0:11:1.1:x:0|1	0/0:11:1.1:xxx:1|1	0/0:11:1.1:xxx:.