File: annotate19.out

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##fileformat=VCFv4.1
##FILTER=<ID=PASS,Description="All filters passed">
##contig=<ID=1,assembly=b37,length=249250621>
##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
##INFO=<ID=FLAG,Number=0,Type=Flag,Description="Test type">
##INFO=<ID=IINT,Number=1,Type=Integer,Description="Test type">
##INFO=<ID=IFLT,Number=1,Type=Float,Description="Test type">
##INFO=<ID=ISTR,Number=1,Type=String,Description="Test type">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=FINT,Number=1,Type=Integer,Description="Test type">
##FORMAT=<ID=FFLT,Number=1,Type=Float,Description="Test type">
##FORMAT=<ID=FSTR,Number=1,Type=String,Description="Test type">
##FILTER=<ID=q11,Description="Quality below 10">
##FILTER=<ID=q99,Description="Quality below 10">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A	B	C
1	3000001	xx	C	T	11	PASS	IINT=11;IFLT=1.1;ISTR=xxx	GT:FINT:FFLT:FSTR	0/0:11:1.1:xxx	0/0:11:1.1:x	.:11:1.1:x
1	3000002	id	C	T	99	q99	FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999	GT	.	.	0|1
1	3000003	id	C	T	99	q11	FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999	GT:FINT:FFLT:FSTR	0/0:.:.:.	0/0:.:.:.	0|1:.:.:.
1	3000004	id	C	T	99	q11	FLAG;IINT=11;IFLT=1.1;ISTR=xxx	GT:FINT:FFLT:FSTR	0/0:11:1.1:x	0/0:11:1.1:xxx	0|1:11:1.1:xxx