File: overlap.vcf

package info (click to toggle)
bcftools 1.16-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 20,252 kB
  • sloc: ansic: 60,589; perl: 5,818; python: 587; sh: 333; makefile: 284
file content (32 lines) | stat: -rw-r--r-- 1,013 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
##fileformat=VCFv4.3
##INFO=<ID=END,Number=1,Type=Integer,Description="End coordinate of this variant">
##contig=<ID=chr1>
##bcftools_annotateVersion=1.13-36-gef5cf0a-dirty+htslib-1.13-19-g31bf087-dirty
##bcftools_annotateCommand=annotate -x FILTER events.vcf.txt; Date=Fri Sep  3 09:42:26 2021
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
chr1	90	outsv1	A	ATGC	.	.	END=99
chr1	90	sv1	A	ATGC	.	.	END=100
chr1	90	sv2	A	ATGC	.	.	END=110
chr1	95	d1	AATGCATGCATGCATGCATGC	A	.	.	.
chr1	98	outd1	AT	A	.	.	.
chr1	98	d2	ATT	A	.	.	.
chr1	98	outi1	A	AT	.	.	.
chr1	99	outs1	A	T	.	.	.
chr1	99	d3	AT	A	.	.	.
chr1	99	outi2	A	AT	.	.	.
chr1	99	outi3	A	ATTTT	.	.	.
chr1	100	s1	A	T	.	.	.
chr1	100	d4	AT	A	.	.	.
chr1	100	i1	A	ATTTT	.	.	.
chr1	101	s2	A	T	.	.	.
chr1	101	i2	A	AT	.	.	.
chr1	198	i3	A	ATTTTT	.	.	.
chr1	199	s3	A	T	.	.	.
chr1	199	d5f	AT	A	.	.	.
chr1	199	i4f	A	ATTTT	.	.	.
chr1	200	s4f	A	T	.	.	.
chr1	200	outd2	AT	A	.	.	.
chr1	200	outi4	A	AT	.	.	.
chr1	201	outs2	A	T	.	.	.
chr1	201	outd3	AT	A	.	.	.
chr1	201	outi5	A	ATTTT	.	.	.