1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
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##fileformat=VCFv4.3
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Number of reads supporting the allele">
##INFO=<ID=AD,Number=R,Type=Integer,Description="Number of reads supporting the allele">
##contig=<ID=1,assembly=b37,length=249250621>
##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B
1 3000150 . C T,A 59.2 PASS AD=0,0,0 GT:AD ./.:0,0,0 ./.:0,0,0
1 3000151 . C T,A 59.2 PASS AD=10,0,0 GT:AD 0/0:10,0,0 0/0:010,0,0
1 3000152 . C T,A 59.2 PASS AD=0,11,0 GT:AD 1/1:0,11,0 1/1:0,110,0
1 3000153 . C T,A 59.2 PASS AD=0,0,21 GT:AD 2/2:0,0,20 2/2:0,0,210
1 3000154 . C T,A 59.2 PASS AD=30,13,0 GT:AD 0/1:30,13,0 0/1:300,13,0
1 3000155 . C T,A 59.2 PASS AD=20,0,10 GT:AD 0/2:20,0,10 0/2:200,0,10
1 3000156 . C T,A 59.2 PASS AD=30,14,0 GT:AD 1/0:30,14,0 1/0:300,14,0
1 3000157 . C T,A 59.2 PASS AD=0,40,10 GT:AD 1/2:0,40,10 1/2:0,400,10
1 3000158 . C T,A 59.2 PASS AD=0,5,30 GT:AD 2/0:0,5,30 2/0:0,5,300
1 3000158 . C T,A 59.2 PASS AD=0,110,30 GT:AD 2/0:1,0,110 2/0:1,0,1100
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