1
2
3
4
5
6
7
8
9
10
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##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##contig=<ID=1>
##contig=<ID=2>
##contig=<ID=20>
##contig=<ID=X>
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
##INFO=<ID=BCSQ,Number=.,Type=String,Description="Local consequence annotation from BCFtools/csq, see http://samtools.github.io/bcftools/howtos/csq-calling.html for details. Format: Consequence|gene|transcript|biotype|strand|amino_acid_change|dna_change|POS(1-based)|AF">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 145075172 . G A . . AF=1;BCSQ=intron|PDE4DIP||protein_coding||||111|2
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