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##fileformat=VCFv4.2
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Conditional genotype quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read depth">
##FORMAT=<ID=MIN_DP,Number=1,Type=Integer,Description="Minimum DP observed within the GVCF block.">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Read depth for each allele">
##FORMAT=<ID=VAF,Number=A,Type=Float,Description="Variant allele fractions.">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Phred-scaled genotype likelihoods rounded to the closest integer">
##FORMAT=<ID=MED_DP,Number=1,Type=Integer,Description="Median DP observed within the GVCF block rounded to the nearest integer.">
##contig=<ID=chr1,length=248956422>
##FORMAT=<ID=DNM,Number=1,Type=Integer,Description="De-novo mutation score given as 1 for Mendelian-incompatible genotypes">
##FORMAT=<ID=VA,Number=1,Type=Integer,Description="The de-novo allele">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT EGAN00001406653 EGAN00001405940 EGAN00001406033
chr1 36 . A <*>,C . . . GT:GQ:MIN_DP:PL:DP:AD:VAF:DNM:VA 0/0:1:0:0,0,0,.,.,.:.:.:.:1:0 2/2:8:.:28,990,990,7,990,0:10:0,0,10:0,1:.:. 0/0:18:6:0,18,179,.,.,.:.:.:.:.:.
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