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##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##reference=file:///seq/references/1000GenomesPilot-NCBI36.fasta
##contig=<ID=20,length=62435964,assembly=B36,md5=f126cdf8a6e0c7f379d618ff66beb2da,species="Homo sapiens",taxonomy=x>
##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FORMAT=<ID=HQ,Number=2,Type=Integer,Description="Haplotype Quality">
##FORMAT=<ID=TS,Number=2,Type=String,Description="Test Empty Format String">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001 NA00002 NA00003
20 14370 rs6054257 G A 29 PASS NS=3;DP=14 GT:GQ:DP:HQ 0|0:48:1:51,51 1|0:48:8:51,51 1/1:43:5:.,.
20 17330 . T A 3 PASS NS=3;DP=11 GT:GQ:DP:HQ ./.:.:.:.,. ./.:.:.:.,. ./.:.:.:.,.
20 1110696 rs6040355 A G,T 67 PASS NS=2;DP=10 GT:GQ:DP:HQ:TS ./.:.:.:.:. ./.:.:.:.:. ./.:.:.:.:.
20 1230237 . T . 47 PASS NS=3;DP=13 GT:GQ:DP:HQ:TS .:.:.:.:. .:.:.:.:. .:.:.:.:.
20 1234567 microsat1 GTC G,GTCT 50 PASS NS=3;DP=9 GT:GQ:DP:TS 0/1:35:4:A,. 0/2:17:2:. 1/1:40:3:.
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