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#!/bin/sh
#
# Copyright (c) 2011 Sascha Steinbiss <steinbiss@zbh.uni-hamburg.de>
# Copyright (c) 2011 Center for Bioinformatics, University of Hamburg
#
# Permission to use, copy, modify, and distribute this software for any
# purpose with or without fee is hereby granted, provided that the above
# copyright notice and this permission notice appear in all copies.
#
# THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
# WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
# ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
# WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
# ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
# OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
#
make cleanup
make -j3 64bit=no cairo=no
bin/gt encseq encode -indexname testdata/foo.32 testdata/foobar.fas
bin/gt encseq info -noindexname testdata/foo.32 > testdata/foo.32.info_map
bin/gt encseq info -noindexname -nomap testdata/foo.32 > testdata/foo.32.info_nomap
make cleanup
make -j3 64bit=yes cairo=no
bin/gt encseq encode -indexname testdata/foo.64 testdata/foobar.fas
bin/gt encseq info -noindexname testdata/foo.64 > testdata/foo.64.info_map
bin/gt encseq info -noindexname -nomap testdata/foo.64 > testdata/foo.64.info_nomap
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