File: run_parse_read.py

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#!/usr/bin/python3

import sys
import os
import subprocess
from parse_read import *

filename = sys.argv[1]
readarg = sys.argv[2]


stream = subprocess.Popen(["DBshow", filename ,readarg],
                                  stdout=subprocess.PIPE,bufsize=1)

reads = parse_read(stream.stdout) # generator

for read in reads:
    print(read)

#print result