package info (click to toggle)
libvcflib 1.0.0~rc2%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 51,048 kB
  • sloc: cpp: 30,004; perl: 474; sh: 247; makefile: 206; python: 200; ansic: 148

Folder: scripts

d .. (parent)
- - rwxr-xr-x 175 bed2region
- - rwxr-xr-x 234 bgziptabix
- - rwxr-xr-x 519 plotBfst.R
- - rwxr-xr-x 566 plotHapLrt.R
- - rwxr-xr-x 646 plotHaplotypes.R
- - rwxr-xr-x 511 plotPfst.R
- - rwxr-xr-x 1,314 plotSmoothed.R
- - rwxr-xr-x 483 plotWCfst.R
- - rwxr-xr-x 474 plotXPEHH.R
- - rwxr-xr-x 6,005 plot_roc.r
- - rwxr-xr-x 429 vcf2bed.py
- - rwxr-xr-x 3,623 vcf2sqlite.py
- - rwxr-xr-x 264 vcf_strip_extra_headers
- - rwxr-xr-x 375 vcfbiallelic
- - rwxr-xr-x 224 vcfclearid
- - rwxr-xr-x 224 vcfclearinfo
- - rwxr-xr-x 526 vcfcomplex
- - rwxr-xr-x 311 vcffirstheader
- - rwxr-xr-x 334 vcfgtcompare.sh
- - rwxr-xr-x 1,763 vcfindelproximity
- - rwxr-xr-x 506 vcfindels
- - rwxr-xr-x 1,157 vcfjoincalls
- - rwxr-xr-x 378 vcfmultiallelic
- - rwxr-xr-x 444 vcfmultiway
- - rwxr-xr-x 777 vcfmultiwayscripts
- - rwxr-xr-x 627 vcfnobiallelicsnps
- - rwxr-xr-x 430 vcfnoindels
- - rwxr-xr-x 522 vcfnosnps
- - rwxr-xr-x 626 vcfnulldotslashdot
- - rwxr-xr-x 22,065 vcfplotaltdiscrepancy.r
- - rwxr-xr-x 179 vcfplotaltdiscrepancy.sh
- - rwxr-xr-x 3,946 vcfplotsitediscrepancy.r
- - rwxr-xr-x 171 vcfplottstv.sh
- - rwxr-xr-x 1,845 vcfprintaltdiscrepancy.r
- - rwxr-xr-x 518 vcfprintaltdiscrepancy.sh
- - rwxr-xr-x 690 vcfqualfilter
- - rwxr-xr-x 843 vcfregionreduce
- - rwxr-xr-x 989 vcfregionreduce_and_cut
- - rwxr-xr-x 782 vcfregionreduce_pipe
- - rwxr-xr-x 835 vcfregionreduce_uncompressed
- - rwxr-xr-x 560 vcfremovenonATGC
- - rwxr-xr-x 525 vcfsnps
- - rwxr-xr-x 83 vcfsort
- - rwxr-xr-x 5,463 vcfvarstats