File: test.fasta

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>Aqui_model.pdb, chain L/1-622
......MKRVVVDPVTRIEGHLRIEIMVDEETGQVKDALSAGTMWRGIELIVRNRDPRDV
WAFTQRICGVCTSIHALASLRAVEDALEITIPKNANYIRNIMYGSLQVHDHVVHFYHLHA
LDWVSPVEALKADPVATAALANKILEKYGVLNEFMPDFLGHRAYPKKFPKATPG....YF
REFQKKIKKLVESGQLGIFAAHWW..DHPDYQMLPPEVHLIGIAHYLNMLDVQRELFIPQ
VVFGGKNPHPHYIVGGVNCSISMDDMN.APVNAERLAVVEDAIYTQVESTDFFYIPDILA
IADIYLNQHNWFYGGGLSKKRVIGYGDYPDEPYTGIKNGDYHKKILWHSNGVVEDFYKGV
EKAKFYNLEGKDFTDPEQIQEFVTHSWYKYPDETKGLHPWDGITEPNYTGPKEGTKTHWK
YLDENGKYSWIKAPRWRGKACEVGPLARYIIVYTKVKQGHIKPTWVDELIVNQIDTVSKI
LNLPPEKWLPTTVGRTIARALEAQMSAHTNLYWMKKLYDNIKAGDTSVANMEKWDPSTWP
KEAKGVGLTEAPRGALGHWVIIKDGKVANYQCVVPTTWNGSPKDPKGQHGAFEESMIDTK
VKVPEKPLEVLRGIHSFDPCLACSTH..................................
.............................................

>Desulfubrio_start.pdb, chain L/7-629
TPQSTFTGPIVVDPITRIEGHLRIMVEVE..NGKVKDAWSSSQLFRGLEIILKGRDPRDA
QHFTQRACGVCTYVHALASSRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHLHA
LDWVDVTAALKADPNKAAKLAASI........................DTARTGNSEKAL
KAVQDKLKAFVESGQLGIFTNAYFLGGHKAY.YLPPEVNLIATAHYLEALHMQVKAASAM
AILGGKNPHTQFTVVG.GCS......NYQGLTKDPLANYLALSKEVCQFVNECYIPDLLA
VAGFYKDWGG..IGG...TSNYLAFGEFA....TDDSSPEKHLATSQFPSGVI....TGR
DLGKVDNV......DLGAIYEDVKYSWYAPGGD..GKHPYDGVTDPKYT...........
KLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAK...GQPDFKKVVDMVLGKLSV....
....PATALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCA...KWE...MP
EESKGVGLADAPRGSLSHWIRIKGKKIDNFQLVVPSTWNLGPRGPQGDKSPVEEALIGTP
IADPKRPVEILRTVHAFDPCIACGVH..................................
.............................................