File: getcurrentcommand.h

package info (click to toggle)
mothur 1.48.1-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 13,692 kB
  • sloc: cpp: 161,866; makefile: 122; sh: 31
file content (46 lines) | stat: -rwxr-xr-x 928 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
#ifndef GETCURRENTCOMMAND_H
#define GETCURRENTCOMMAND_H

/*
 *  getcurrentcommand.h
 *  Mothur
 *
 *  Created by westcott on 3/16/11.
 *  Copyright 2011 Schloss Lab. All rights reserved.
 *
 */

#include "command.hpp"
#include "commandfactory.hpp"

class GetCurrentCommand : public Command {

	public:
		GetCurrentCommand(string);
		~GetCurrentCommand() = default;
	
		vector<string> setParameters();
		string getCommandName()			{ return "get.current";	}
		string getCommandCategory()		{ return "General";		}
        string getHelpString();	
        string getOutputPattern(string);
		string getCitation() { return "http://www.mothur.org/wiki/Get.current"; }
		string getDescription()		{ return "get current files saved by mothur"; }

	
		int execute(); 
		void help() { m->mothurOut(getHelpString()); }	
	
	
	private:
		
		vector<string> outputNames;
		bool abort;
	
		string clearTypes;
		vector<string> types;
		
};

#endif