File: bismark.md

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---
Name: Bismark
URL: http://www.bioinformatics.babraham.ac.uk/projects/bismark/
Description: >
  Bismark is a tool to map bisulfite converted sequence reads and determine
  cytosine methylation states.
---

The Bismark module parses logs generated by
[Bismark](http://www.bioinformatics.babraham.ac.uk/projects/bismark/),
a tool to map bisulfite converted sequence reads and determine
cytosine methylation states.