File: multivcfanalyzer.md

package info (click to toggle)
multiqc 1.14%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 28,824 kB
  • sloc: python: 41,884; javascript: 4,651; sh: 74; makefile: 24
file content (8 lines) | stat: -rw-r--r-- 540 bytes parent folder | download
1
2
3
4
5
6
7
8
---
Name: MultiVCFAnalyzer
URL: http://www.github.com/alexherbig/MultiVCFAnalyzer
Description: >
  MultiVCFAnalyzer collects multiple VCF files and outputs combined genotype calls in a number of file formats.
---

MultiVCFanalyzer reads multiple VCF files as produced by GATK UnifiedGenotyper, performs filtering based on a number of criteria, and provides the combined genotype calls in a number of formats that are suitable for follow-up analyses such as phylogenetic reconstruction, SNP effect analyses, population genetic analyses etc.