File: FileMerger_3_output.mzML

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<?xml version="1.0" encoding="ISO-8859-1"?>
<mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" accession="" version="1.1.0">
	<cvList count="5">
		<cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/>
		<cv id="UO" fullName="Unit Ontology" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo"/>
		<cv id="BTO" fullName="BrendaTissue545" version="unknown" URI="http://www.brenda-enzymes.info/ontology/tissue/tree/update/update_files/BrendaTissueOBO"/>
		<cv id="GO" fullName="Gene Ontology - Slim Versions" version="unknown" URI="http://www.geneontology.org/GO_slims/goslim_goa.obo"/>
		<cv id="PATO" fullName="Quality ontology" version="unknown" URI="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/quality.obo"/>
	</cvList>
	<fileDescription>
		<fileContent>
			<cvParam cvRef="MS" accession="MS:1000294" name="mass spectrum" />
		</fileContent>
		<sourceFileList count="2">
			<sourceFile id="sf_sp_0" name="FileMerger_3_input1.dta" location="<TEST_DATA_PATH>">
				<cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="157c05945aae6e864090d1033611ab0c048193a7" />
				<cvParam cvRef="MS" accession="MS:1000613" name="DTA file" />
				<cvParam cvRef="MS" accession="MS:1000777" name="spectrum identifier nativeID format" />
			</sourceFile>
			<sourceFile id="sf_sp_1" name="FileMerger_3_input2.dta" location="<TEST_DATA_PATH>">
				<cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="bbee73d177ce92065984b078309de6dcd0db4a2c" />
				<cvParam cvRef="MS" accession="MS:1000613" name="DTA file" />
				<cvParam cvRef="MS" accession="MS:1000777" name="spectrum identifier nativeID format" />
			</sourceFile>
		</sourceFileList>
	</fileDescription>
	<sampleList count="1">
		<sample id="sa_0" name="">
			<cvParam cvRef="MS" accession="MS:1000004" name="sample mass" value="0" unitAccession="UO:0000021" unitName="gram" unitCvRef="UO" />
			<cvParam cvRef="MS" accession="MS:1000005" name="sample volume" value="0" unitAccession="UO:0000098" unitName="milliliter" unitCvRef="UO" />
			<cvParam cvRef="MS" accession="MS:1000006" name="sample concentration" value="0" unitAccession="UO:0000175" unitName="gram per liter" unitCvRef="UO" />
		</sample>
	</sampleList>
	<softwareList count="3">
		<software id="so_in_0" version="" >
			<cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" />
		</software>
		<software id="so_default" version="" >
			<cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" />
		</software>
		<software id="so_dp_sp_0_pm_0" version="version_string" >
			<cvParam cvRef="MS" accession="MS:1000758" name="FileMerger" />
		</software>
	</softwareList>
	<instrumentConfigurationList count="1">
		<instrumentConfiguration id="ic_0">
			<cvParam cvRef="MS" accession="MS:1000031" name="instrument model" />
			<softwareRef ref="so_in_0" />
		</instrumentConfiguration>
	</instrumentConfigurationList>
	<dataProcessingList count="1">
		<dataProcessing id="dp_sp_0">
			<processingMethod order="0" softwareRef="so_dp_sp_0_pm_0">
				<cvParam cvRef="MS" accession="MS:1000530" name="file format conversion" />
				<cvParam cvRef="MS" accession="MS:1000747" name="completion time" value="1999-12-31+23:59" />
				<userParam name="parameter: mode" type="xsd:string" value="test_mode"/>
			</processingMethod>
		</dataProcessing>
	</dataProcessingList>
	<run id="ru_0" defaultInstrumentConfigurationRef="ic_0" sampleRef="sa_0">
		<spectrumList count="2" defaultDataProcessingRef="dp_sp_0">
			<spectrum id="spectrum=0" index="0" defaultArrayLength="3" sourceFileRef="sf_sp_0" dataProcessingRef="dp_sp_0">
				<cvParam cvRef="MS" accession="MS:1000525" name="spectrum representation" />
				<cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1" />
				<cvParam cvRef="MS" accession="MS:1000294" name="mass spectrum" />
				<scanList count="1">
					<cvParam cvRef="MS" accession="MS:1000795" name="no combination" />
					<scan>
						<cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="1" unitAccession="UO:0000010" unitName="second" unitCvRef="UO" />
					</scan>
				</scanList>
			<precursorList count="1">
					<precursor>
						<isolationWindow>
							<cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="1500" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
							<cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
							<cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
						</isolationWindow>
						<selectedIonList count="1">
							<selectedIon>
								<cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="1500" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
								<cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="1" />
								<cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="0" unitAccession="MS:1000132" unitName="percent of base peak" unitCvRef="MS" />
							</selectedIon>
						</selectedIonList>
						<activation>
							<cvParam cvRef="MS" accession="MS:1000044" name="dissociation method" />
						</activation>
					</precursor>
			</precursorList>
				<binaryDataArrayList count="2">
					<binaryDataArray encodedLength="32">
						<cvParam cvRef="MS" accession="MS:1000514" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
						<cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" />
						<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
						<binary>AAAAAAAAaUAAAAAAAMByQAAAAAAAAHlA</binary>
					</binaryDataArray>
					<binaryDataArray encodedLength="16">
						<cvParam cvRef="MS" accession="MS:1000515" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS"/>
						<cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" />
						<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
						<binary>AAAwQQAAQEEAAFBB</binary>
					</binaryDataArray>
				</binaryDataArrayList>
			</spectrum>
			<spectrum id="spectrum=1" index="1" defaultArrayLength="3" sourceFileRef="sf_sp_1">
				<cvParam cvRef="MS" accession="MS:1000525" name="spectrum representation" />
				<cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1" />
				<cvParam cvRef="MS" accession="MS:1000294" name="mass spectrum" />
				<scanList count="1">
					<cvParam cvRef="MS" accession="MS:1000795" name="no combination" />
					<scan>
						<cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="2" unitAccession="UO:0000010" unitName="second" unitCvRef="UO" />
					</scan>
				</scanList>
			<precursorList count="1">
					<precursor>
						<isolationWindow>
							<cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="500.671517644514" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
							<cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
							<cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
						</isolationWindow>
						<selectedIonList count="1">
							<selectedIon>
								<cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="500.671517644514" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
								<cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="3" />
								<cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="0" unitAccession="MS:1000132" unitName="percent of base peak" unitCvRef="MS" />
							</selectedIon>
						</selectedIonList>
						<activation>
							<cvParam cvRef="MS" accession="MS:1000044" name="dissociation method" />
						</activation>
					</precursor>
			</precursorList>
				<binaryDataArrayList count="2">
					<binaryDataArray encodedLength="32">
						<cvParam cvRef="MS" accession="MS:1000514" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
						<cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" />
						<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
						<binary>AAAAAADAgkAAAAAAAACJQAAAAAAAQI9A</binary>
					</binaryDataArray>
					<binaryDataArray encodedLength="16">
						<cvParam cvRef="MS" accession="MS:1000515" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS"/>
						<cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" />
						<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
						<binary>AACoQQAAsEEAALhB</binary>
					</binaryDataArray>
				</binaryDataArrayList>
			</spectrum>
		</spectrumList>
	</run>
</mzML>