1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
|
<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="http://open-ms.sourceforge.net/XSL/IdXML.xsl" ?>
<IdXML version="1.2" xsi:noNamespaceSchemaLocation="http://open-ms.sourceforge.net/SCHEMAS/IdXML_1_2.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<SearchParameters id="SP_0" db="18mix_SoCe_tar_dec" db_version="18Protein_SoCe_Tr_detergents_trace_target_decoy_20090803.fasta" taxonomy="All entries" mass_type="monoisotopic" charges="" enzyme="trypsin" missed_cleavages="1" precursor_peak_tolerance="10" peak_mass_tolerance="0.5" >
<FixedModification name="Carbamidomethyl (C)" />
<VariableModification name="Oxidation (M)" />
</SearchParameters>
<IdentificationRun date="2009-10-06T16:17:27" search_engine="Mascot" search_engine_version="2.2.04" search_parameters_ref="SP_0" >
<ProteinIdentification score_type="Mascot" higher_score_better="true" significance_threshold="0" >
<ProteinHit id="PH_0" accession="Q29443|TRFE_BOVIN" score="2177" sequence="" >
</ProteinHit>
<ProteinHit id="PH_1" accession="tr|A9GC70|A9GC70_SORC5rev" score="0" sequence="" >
</ProteinHit>
<ProteinHit id="PH_2" accession="P00634|PPB_ECOLI" score="1919" sequence="" >
</ProteinHit>
<ProteinHit id="PH_3" accession="P02769|ALBU_BOVIN" score="1375" sequence="" >
</ProteinHit>
<ProteinHit id="PH_4" accession="P00722|BGAL_ECOLI" score="1131" sequence="" >
</ProteinHit>
<ProteinHit id="PH_5" accession="P00432|CATA_BOVIN" score="907" sequence="" >
</ProteinHit>
<ProteinHit id="PH_6" accession="P00489|PYGM_RABIT" score="859" sequence="" >
</ProteinHit>
<ProteinHit id="PH_7" accession="P06278|AMY_BACLI" score="733" sequence="" >
</ProteinHit>
<ProteinHit id="PH_8" accession="P46406|G3P_RABIT" score="682" sequence="" >
</ProteinHit>
<ProteinHit id="PH_9" accession="P62739|ACTA_BOVIN" score="679" sequence="" >
</ProteinHit>
<ProteinHit id="PH_10" accession="tr|A9FZB2|A9FZB2_SORC5rev" score="26" sequence="" >
</ProteinHit>
<ProteinHit id="PH_11" accession="P00946|MANA_ECOLI" score="495" sequence="" >
</ProteinHit>
</ProteinIdentification>
<PeptideIdentification score_type="Mascot" higher_score_better="true" significance_threshold="15" MZ="300.164093" RT="1437.53" >
<PeptideHit score="14.45" sequence="LC(Carbamidomethyl)VLHEK" charge="3" aa_before="R" aa_after="T" protein_refs="PH_3" >
<UserParam type="float" name="homology_threshold" value="15"/>
<UserParam type="float" name="identity_threshold" value="22"/>
<UserParam type="float" name="EValue" value="0.79432823472"/>
</PeptideHit>
<PeptideHit score="1.64" sequence="WSDLHLK" charge="3" >
<UserParam type="float" name="homology_threshold" value="15"/>
<UserParam type="float" name="identity_threshold" value="22"/>
<UserParam type="float" name="EValue" value="0.34673685045"/>
</PeptideHit>
</PeptideIdentification>
<PeptideIdentification score_type="Mascot" higher_score_better="true" significance_threshold="13" MZ="301.8590088" RT="1754.8" >
<PeptideHit score="18.76" sequence="TKIPAVFK" charge="3" >
<UserParam type="float" name="homology_threshold" value="0"/>
<UserParam type="float" name="identity_threshold" value="13"/>
<UserParam type="float" name="EValue" value="0.0063095734448"/>
</PeptideHit>
</PeptideIdentification>
<PeptideIdentification score_type="Mascot" higher_score_better="true" significance_threshold="13" MZ="308.5265198" RT="1374.39" >
<PeptideHit score="21.2" sequence="IIAPPERK" charge="3" aa_before="K" aa_after="Y" protein_refs="PH_9" >
<UserParam type="float" name="homology_threshold" value="0"/>
<UserParam type="float" name="identity_threshold" value="13"/>
<UserParam type="float" name="EValue" value="1e-5"/>
</PeptideHit>
<PeptideHit score="5.7" sequence="LPSAPLAVR" charge="3" >
<UserParam type="float" name="homology_threshold" value="13"/>
<UserParam type="float" name="identity_threshold" value="13"/>
<UserParam type="float" name="EValue" value="4.78630092323e-6"/>
</PeptideHit>
<PeptideHit score="5.25" sequence="ISPPAALVR" charge="3" >
<UserParam type="float" name="homology_threshold" value="13"/>
<UserParam type="float" name="identity_threshold" value="13"/>
<UserParam type="float" name="EValue" value="2.08929613085e-6"/>
</PeptideHit>
</PeptideIdentification>
<PeptideIdentification score_type="Mascot" higher_score_better="true" significance_threshold="15" MZ="309.1685791" RT="3449.33" >
<PeptideHit score="17.01" sequence="LHQSDVAR" charge="3" >
<UserParam type="float" name="homology_threshold" value="15"/>
<UserParam type="float" name="identity_threshold" value="26"/>
<UserParam type="float" name="EValue" value="1.17489755494e-6"/>
</PeptideHit>
<PeptideHit score="1.93" sequence="AAGHAKGSAR" charge="3" >
<UserParam type="float" name="homology_threshold" value="15"/>
<UserParam type="float" name="identity_threshold" value="26"/>
<UserParam type="float" name="EValue" value="2.39883291902e-07"/>
</PeptideHit>
</PeptideIdentification>
</IdentificationRun>
</IdXML>
|
