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pbseqlib 5.3.1%2Bdfsg-2.1
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 7,136 kB
  • sloc: cpp: 77,246; python: 570; makefile: 312; sh: 111; ansic: 9

Folder: alignment

d .. (parent)
d d rwxr-xr-x 4,096 sdp
- - rw-r--r-- 21,547 AffineGuidedAlign.hpp
- - rw-r--r-- 14,470 AffineKBandAlign.hpp
- - rw-r--r-- 253 AlignmentFormats.hpp
- - rw-r--r-- 1,010 AlignmentUtils.cpp
- - rw-r--r-- 5,585 AlignmentUtils.hpp
- - rw-r--r-- 18,470 AlignmentUtilsImpl.hpp
- - rw-r--r-- 403 BaseScoreFunction.cpp
- - rw-r--r-- 446 BaseScoreFunction.hpp
- - rw-r--r-- 1,664 DistanceMatrixScoreFunction.hpp
- - rw-r--r-- 4,641 DistanceMatrixScoreFunctionImpl.hpp
- - rw-r--r-- 1,836 ExtendAlign.cpp
- - rw-r--r-- 14,955 ExtendAlign.hpp
- - rw-r--r-- 5,694 FullQVAlign.hpp
- - rw-r--r-- 737 GraphPaper.hpp
- - rw-r--r-- 4,795 GraphPaperImpl.hpp
- - rw-r--r-- 7,760 GuidedAlign.cpp
- - rw-r--r-- 21,551 GuidedAlign.hpp
- - rw-r--r-- 5,463 IDSScoreFunction.cpp
- - rw-r--r-- 5,922 IDSScoreFunction.hpp
- - rw-r--r-- 867 KBandAlign.cpp
- - rw-r--r-- 12,931 KBandAlign.hpp
- - rw-r--r-- 12,739 OneGapAlignment.hpp
- - rw-r--r-- 5,160 QualityValueScoreFunction.cpp
- - rw-r--r-- 2,595 QualityValueScoreFunction.hpp
- - rw-r--r-- 2,536 SDPAlign.hpp
- - rw-r--r-- 26,297 SDPAlignImpl.hpp
- - rw-r--r-- 508 SWAlign.hpp
- - rw-r--r-- 15,288 SWAlignImpl.hpp
- - rw-r--r-- 973 ScoreMatrices.cpp
- - rw-r--r-- 378 ScoreMatrices.hpp
- - rw-r--r-- 607 StringToScoreMatrix.cpp
- - rw-r--r-- 212 StringToScoreMatrix.hpp
- - rw-r--r-- 1,152 meson.build