1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
|
#!/usr/bin/env python
# This code is part of the Biopython distribution and governed by its
# license. Please see the LICENSE file that should have been included
# as part of this package.
"""Run BioSQL tests using SQLite"""
from Bio import MissingExternalDependencyError
from BioSQL import BioSeqDatabase
from common_BioSQL import *
DBDRIVER = 'MySQLdb'
DBTYPE = 'mysql'
DBHOST, DBUSER, DBPASSWD, TESTDB = load_biosql_ini(DBTYPE)
# This will abort if driver not installed etc:
check_config(DBDRIVER, DBTYPE, DBHOST, DBUSER, DBPASSWD, TESTDB)
# Some of the unit tests don't create their own database,
# so just in case there is no database already:
TESTDB = create_database()
if __name__ == "__main__":
# Run the test cases
runner = unittest.TextTestRunner(verbosity=2)
unittest.main(testRunner=runner)
|
