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BLASTX 2.2.26+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: NCBI Protein Reference Sequences
11,879,989 sequences; 4,140,237,112 total letters
Query= hg19_dna range=chr1:1207057-1207541 5'pad=0 3'pad=0 strand=+
repeatMasking=none
Length=485
Score E
Sequences producing significant alignments: (Bits) Value
ref|XP_003278367.1| PREDICTED: UPF0764 protein C16orf89-like [No... 121 2e-32
ref|NP_001243358.1| PDZ and LIM domain protein 5 isoform i [Homo... 114 1e-29
ref|XP_002812869.1| PREDICTED: histone demethylase UTY-like [Pon... 98.2 1e-23
ref|XP_003309509.1| PREDICTED: histone demethylase UTY-like [Pan... 97.1 3e-23
ref|NP_001009002.1| histone demethylase UTY [Pan troglodytes] 104 3e-23
ref|NP_872601.1| histone demethylase UTY isoform 1 [Homo sapiens] 104 4e-23
ref|XP_001170404.1| PREDICTED: UPF0764 protein C16orf89-like iso... 100 1e-22
ref|XP_003269292.1| PREDICTED: UPF0764 protein C16orf89-like iso... 99.0 3e-22
ref|XP_003403869.1| PREDICTED: hypothetical protein LOC548324 [H... 95.1 1e-21
ref|NP_689672.4| UPF0764 protein C16orf89 isoform 1 precursor [H... 94.7 1e-20
ref|NP_001158011.1| disrupted in schizophrenia 1 protein isoform... 89.7 3e-18
ref|XP_003119509.1| PREDICTED: hypothetical protein LOC100507445... 82.4 1e-17
ref|XP_003308863.1| PREDICTED: disrupted in schizophrenia 1 prot... 87.4 2e-17
ref|ZP_02871977.1| hypothetical protein cdivTM_17066 [candidate ... 72.8 6e-17
ref|XP_003312100.1| PREDICTED: putative calcium-sensing receptor... 69.7 3e-15
ref|XP_003119043.1| PREDICTED: hypothetical protein LOC100506191... 63.2 3e-14
ref|ZP_02873125.1| hypothetical protein cdivTM_22884 [candidate ... 72.0 9e-14
ref|XP_003254420.1| PREDICTED: elongator complex protein 4 isofo... 75.9 1e-13
ref|XP_002801523.1| PREDICTED: hypothetical protein LOC100424605... 71.6 2e-13
ref|NP_001243297.1| uncharacterized protein LOC100144595 [Homo s... 61.6 3e-13
>ref|XP_003278367.1| PREDICTED: UPF0764 protein C16orf89-like [Nomascus leucogenys]
Length=132
Score = 121 bits (304), Expect = 2e-32
Identities = 69/95 (73%), Positives = 74/95 (78%), Gaps = 0/95 (0%)
Frame = -3
Query 300 LRRSFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGF 121
LRRSFALVAQ VQW +LG PQPPPPGFK FSCLS SSW+YRH+PP L NF+FLVE GF
Sbjct 25 LRRSFALVAQTRVQWYNLGSPQPPPPGFKRFSCLSLLSSWEYRHVPPHLANFLFLVEMGF 84
Query 120 YHVGQAGLEPPISGNLPAWASQSVGITGVSHHAQP 16
HVGQAGLE SG+ P SQS GI GVSH AQP
Sbjct 85 LHVGQAGLELVTSGDPPTLTSQSAGIIGVSHCAQP 119
Score = 51.6 bits (122), Expect = 2e-06
Identities = 34/72 (47%), Positives = 41/72 (57%), Gaps = 5/72 (7%)
Frame = -3
Query 459 VGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFAL 280
V RVQ ++L S QPP P FK FS LSL SSW+ R PPH AN F F + F
Sbjct 32 VAQTRVQWYNLGSPQPPPPGFKRFSCLSLLSSWEYRHVPPHLAN-----FLFLVEMGFLH 86
Query 279 VAQAGVQWLDLG 244
V QAG++ + G
Sbjct 87 VGQAGLELVTSG 98
>ref|NP_001243358.1| PDZ and LIM domain protein 5 isoform i [Homo sapiens]
Length=136
Score = 114 bits (286), Expect = 1e-29
Identities = 63/88 (72%), Positives = 69/88 (78%), Gaps = 0/88 (0%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG 100
++ AGVQW +LG PQPP P FK FSCLS PSSWDYRH+PP L NFVFLVET F +VGQAG
Sbjct 30 ISSAGVQWRNLGSPQPPSPEFKRFSCLSLPSSWDYRHVPPRLANFVFLVETKFPYVGQAG 89
Query 99 LEPPISGNLPAWASQSVGITGVSHHAQP 16
LE P SG+LP ASQS ITGVSH A P
Sbjct 90 LELPTSGDLPTSASQSAKITGVSHRAWP 117
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/69 (48%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query 465 VSVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSF 286
+++ A VQ +L S QPP+PEFK FS LSL SSWD R PP AN F F + F
Sbjct 28 LTISSAGVQWRNLGSPQPPSPEFKRFSCLSLPSSWDYRHVPPRLAN-----FVFLVETKF 82
Query 285 ALVAQAGVQ 259
V QAG++
Sbjct 83 PYVGQAGLE 91
>ref|XP_002812869.1| PREDICTED: histone demethylase UTY-like [Pongo abelii]
Length=110
Score = 98.2 bits (243), Expect = 1e-23
Identities = 57/91 (63%), Positives = 64/91 (70%), Gaps = 0/91 (0%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG 100
V AGVQW +L QPPP GFK FS LS SSWD R PP L+ FVFL+ETGF+HVGQAG
Sbjct 19 VPHAGVQWHNLSSLQPPPSGFKPFSYLSLLSSWDQRRPPPRLVIFVFLIETGFHHVGQAG 78
Query 99 LEPPISGNLPAWASQSVGITGVSHHAQPLCE 7
L+ G+ PA ASQS GI GVSH A P C+
Sbjct 79 LKLLTLGDPPASASQSAGIRGVSHCAWPECQ 109
>ref|XP_003309509.1| PREDICTED: histone demethylase UTY-like [Pan troglodytes]
Length=101
Score = 97.1 bits (240), Expect = 3e-23
Identities = 56/91 (62%), Positives = 62/91 (68%), Gaps = 0/91 (0%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG 100
V AGVQW +L QPPP FK FS LS SSWD R PPCL+ FVFL+ETGF HVGQAG
Sbjct 10 VPHAGVQWHNLSSLQPPPSRFKPFSYLSLLSSWDQRRPPPCLVTFVFLIETGFRHVGQAG 69
Query 99 LEPPISGNLPAWASQSVGITGVSHHAQPLCE 7
L+ SG+ A ASQS GI GVSH P C+
Sbjct 70 LKLLTSGDPSASASQSAGIRGVSHCTWPECQ 100
Score = 55.5 bits (132), Expect = 5e-08
Identities = 37/73 (51%), Positives = 42/73 (58%), Gaps = 5/73 (7%)
Frame = -3
Query 462 SVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFA 283
SV A VQ H+LSSLQPP FK FS+LSL SSWD R PPP F F + F
Sbjct 9 SVPHAGVQWHNLSSLQPPPSRFKPFSYLSLLSSWDQRRPPP-----CLVTFVFLIETGFR 63
Query 282 LVAQAGVQWLDLG 244
V QAG++ L G
Sbjct 64 HVGQAGLKLLTSG 76
>ref|NP_001009002.1| histone demethylase UTY [Pan troglodytes]
Length=1079
Score = 104 bits (260), Expect = 3e-23
Identities = 59/91 (65%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
Frame = -3
Query 291 SFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHV 112
SF +AG+QW DL QPPPPGFK FS LS P+SW+YRH+P C NF VETGF+HV
Sbjct 989 SFQESLRAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHV 1048
Query 111 GQAGLEPPISGNLPAWASQSVGITGVSHHAQ 19
GQA LE SG L A ASQS GITGVSHHA+
Sbjct 1049 GQAHLELLTSGGLLASASQSAGITGVSHHAR 1079
Score = 47.8 bits (112), Expect = 3e-04
Identities = 25/41 (61%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Frame = -3
Query 450 ARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPAN 328
A +Q DLSSLQPP P FK FSHLSL +SW+ R P P N
Sbjct 996 AGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTN 1036
>ref|NP_872601.1| histone demethylase UTY isoform 1 [Homo sapiens]
Length=1079
Score = 104 bits (259), Expect = 4e-23
Identities = 59/91 (65%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
Frame = -3
Query 291 SFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHV 112
SF +AG+QW DL QPPPPGFK FS LS P+SW+YRH+P C NF VETGF+HV
Sbjct 989 SFQESLRAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHV 1048
Query 111 GQAGLEPPISGNLPAWASQSVGITGVSHHAQ 19
GQA LE SG L A ASQS GITGVSHHA+
Sbjct 1049 GQACLELLTSGGLLASASQSAGITGVSHHAR 1079
Score = 47.8 bits (112), Expect = 3e-04
Identities = 25/41 (61%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Frame = -3
Query 450 ARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPAN 328
A +Q DLSSLQPP P FK FSHLSL +SW+ R P P N
Sbjct 996 AGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTN 1036
>ref|XP_001170404.1| PREDICTED: UPF0764 protein C16orf89-like isoform 3 [Pan troglodytes]
Length=440
Score = 100 bits (249), Expect = 1e-22
Identities = 56/80 (70%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINF-VFLVETGFYHVGQA 103
VAQAGVQW DLG QP PPGFK FSCL PSSWDYR MPP L+NF +FLVETGF+HV A
Sbjct 361 VAQAGVQWRDLGSLQPLPPGFKQFSCLILPSSWDYRSMPPYLVNFYIFLVETGFHHVAHA 420
Query 102 GLEPPISGNLPAWASQSVGI 43
GLE IS + P SQSVG+
Sbjct 421 GLELLISSDPPTSGSQSVGL 440
Score = 47.8 bits (112), Expect = 2e-04
Identities = 34/70 (49%), Positives = 39/70 (56%), Gaps = 4/70 (6%)
Frame = -3
Query 462 SVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFA 283
SV A VQ DL SLQP P FK FS L L SSWD R PP+ N F+ F + F
Sbjct 360 SVAQAGVQWRDLGSLQPLPPGFKQFSCLILPSSWDYRSMPPYLVN----FYIFLVETGFH 415
Query 282 LVAQAGVQWL 253
VA AG++ L
Sbjct 416 HVAHAGLELL 425
>ref|XP_003269292.1| PREDICTED: UPF0764 protein C16orf89-like isoform 2 [Nomascus
leucogenys]
Length=402
Score = 99.0 bits (245), Expect = 3e-22
Identities = 56/80 (70%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINF-VFLVETGFYHVGQA 103
VAQAGVQW DLG QP PPGFK F CL PSSWDYR MPP L NF +FLVETGF+HV A
Sbjct 323 VAQAGVQWHDLGSLQPLPPGFKRFFCLILPSSWDYRSMPPYLANFYIFLVETGFHHVAHA 382
Query 102 GLEPPISGNLPAWASQSVGI 43
GLE IS +LP SQSVG+
Sbjct 383 GLELLISSDLPTSGSQSVGL 402
Score = 50.1 bits (118), Expect = 4e-05
Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 4/70 (6%)
Frame = -3
Query 462 SVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFA 283
SV A VQ HDL SLQP P FK F L L SSWD R PP+ AN F+ F + F
Sbjct 322 SVAQAGVQWHDLGSLQPLPPGFKRFFCLILPSSWDYRSMPPYLAN----FYIFLVETGFH 377
Query 282 LVAQAGVQWL 253
VA AG++ L
Sbjct 378 HVAHAGLELL 387
>ref|XP_003403869.1| PREDICTED: hypothetical protein LOC548324 [Homo sapiens]
ref|XP_003403493.1| PREDICTED: hypothetical protein LOC548324 [Homo sapiens]
Length=195
Score = 95.1 bits (235), Expect = 1e-21
Identities = 55/82 (67%), Positives = 57/82 (70%), Gaps = 1/82 (1%)
Frame = -3
Query 261 QWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAGLEPPIS 82
QW DLG QPP P FK FSCLS PSSWDYR P NF LVE GF+HVGQA LE S
Sbjct 107 QWCDLGSLQPPSPRFKGFSCLSLPSSWDYRRAPSPA-NFCILVEMGFHHVGQADLELLTS 165
Query 81 GNLPAWASQSVGITGVSHHAQP 16
+LP ASQS GITGVSHHA P
Sbjct 166 ADLPTSASQSAGITGVSHHAWP 187
Score = 46.6 bits (109), Expect = 3e-04
Identities = 28/51 (55%), Positives = 33/51 (65%), Gaps = 3/51 (6%)
Frame = -3
Query 480 FF*YRVSVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPAN 328
FF + +++ P Q DL SLQPP+P FK FS LSL SSWD R P PAN
Sbjct 96 FFRWSLALSPR--QWCDLGSLQPPSPRFKGFSCLSLPSSWDYR-RAPSPAN 143
>ref|NP_689672.4| UPF0764 protein C16orf89 isoform 1 precursor [Homo sapiens]
Length=402
Score = 94.7 bits (234), Expect = 1e-20
Identities = 54/80 (68%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINF-VFLVETGFYHVGQA 103
VAQAGVQW +LG QP PPGFK FSCL PSSWDYR +PP L NF +FLVETGF+HV A
Sbjct 323 VAQAGVQWRNLGSLQPLPPGFKQFSCLILPSSWDYRSVPPYLANFYIFLVETGFHHVAHA 382
Query 102 GLEPPISGNLPAWASQSVGI 43
GLE IS + P SQSVG+
Sbjct 383 GLELLISRDPPTSGSQSVGL 402
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 101801941670
Database: NCBI Protein Reference Sequences
Posted date: Mar 18, 2012 8:41 PM
Number of letters in database: 4,140,237,112
Number of sequences in database: 11,879,989
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 12
Window for multiple hits: 40
|
