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BLASTX 2.2.26+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: minirefseq_prot
20 sequences; 6,406 total letters
Query= random_s00
Length=128
***** No hits found *****
Effective search space used: 0
Query= hg19_dna range=chr1:1207057-1207541 5'pad=0 3'pad=0 strand=+
repeatMasking=none
Length=485
Score E
Sequences producing significant alignments: (Bits) Value
gi|332258565|ref|XP_003278367.1| PREDICTED: UPF0764 protein C16... 121 3e-38
gi|374093214|ref|NP_001243358.1| PDZ and LIM domain protein 5 i... 114 2e-35
gi|297669362|ref|XP_002812869.1| PREDICTED: histone demethylase... 98.2 2e-29
gi|57113895|ref|NP_001009002.1| histone demethylase UTY [Pan tr... 104 5e-29
gi|33188429|ref|NP_872601.1| histone demethylase UTY isoform 1 ... 104 6e-29
gi|42560248|ref|NP_002692.2| POU domain, class 5, transcription... 17.3 5.0
gi|149754664|ref|XP_001490158.1| PREDICTED: POU domain, class 5... 17.3 5.0
gi|354487500|ref|XP_003505911.1| PREDICTED: POU domain, class 5... 16.9 6.6
> gi|332258565|ref|XP_003278367.1| PREDICTED: UPF0764 protein C16orf89-like
[Nomascus leucogenys]
Length=132
Score = 121 bits (304), Expect = 3e-38
Identities = 69/95 (73%), Positives = 74/95 (78%), Gaps = 0/95 (0%)
Frame = -3
Query 300 LRRSFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGF 121
LRRSFALVAQ VQW +LG PQPPPPGFK FSCLS SSW+YRH+PP L NF+FLVE GF
Sbjct 25 LRRSFALVAQTRVQWYNLGSPQPPPPGFKRFSCLSLLSSWEYRHVPPHLANFLFLVEMGF 84
Query 120 YHVGQAGLEPPISGNLPAWASQSVGITGVSHHAQP 16
HVGQAGLE SG+ P SQS GI GVSH AQP
Sbjct 85 LHVGQAGLELVTSGDPPTLTSQSAGIIGVSHCAQP 119
Score = 51.6 bits (122), Expect = 3e-12
Identities = 34/72 (47%), Positives = 41/72 (57%), Gaps = 5/72 (7%)
Frame = -3
Query 459 VGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFAL 280
V RVQ ++L S QPP P FK FS LSL SSW+ R PPH AN F F + F
Sbjct 32 VAQTRVQWYNLGSPQPPPPGFKRFSCLSLLSSWEYRHVPPHLAN-----FLFLVEMGFLH 86
Query 279 VAQAGVQWLDLG 244
V QAG++ + G
Sbjct 87 VGQAGLELVTSG 98
> gi|374093214|ref|NP_001243358.1| PDZ and LIM domain protein 5
isoform i [Homo sapiens]
Length=136
Score = 114 bits (286), Expect = 2e-35
Identities = 63/88 (72%), Positives = 69/88 (78%), Gaps = 0/88 (0%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG 100
++ AGVQW +LG PQPP P FK FSCLS PSSWDYRH+PP L NFVFLVET F +VGQAG
Sbjct 30 ISSAGVQWRNLGSPQPPSPEFKRFSCLSLPSSWDYRHVPPRLANFVFLVETKFPYVGQAG 89
Query 99 LEPPISGNLPAWASQSVGITGVSHHAQP 16
LE P SG+LP ASQS ITGVSH A P
Sbjct 90 LELPTSGDLPTSASQSAKITGVSHRAWP 117
Score = 52.4 bits (124), Expect = 2e-12
Identities = 33/69 (48%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query 465 VSVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSF 286
+++ A VQ +L S QPP+PEFK FS LSL SSWD R PP AN F F + F
Sbjct 28 LTISSAGVQWRNLGSPQPPSPEFKRFSCLSLPSSWDYRHVPPRLAN-----FVFLVETKF 82
Query 285 ALVAQAGVQ 259
V QAG++
Sbjct 83 PYVGQAGLE 91
> gi|297669362|ref|XP_002812869.1| PREDICTED: histone demethylase
UTY-like [Pongo abelii]
Length=110
Score = 98.2 bits (243), Expect = 2e-29
Identities = 57/91 (63%), Positives = 64/91 (70%), Gaps = 0/91 (0%)
Frame = -3
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG 100
V AGVQW +L QPPP GFK FS LS SSWD R PP L+ FVFL+ETGF+HVGQAG
Sbjct 19 VPHAGVQWHNLSSLQPPPSGFKPFSYLSLLSSWDQRRPPPRLVIFVFLIETGFHHVGQAG 78
Query 99 LEPPISGNLPAWASQSVGITGVSHHAQPLCE 7
L+ G+ PA ASQS GI GVSH A P C+
Sbjct 79 LKLLTLGDPPASASQSAGIRGVSHCAWPECQ 109
> gi|57113895|ref|NP_001009002.1| histone demethylase UTY [Pan
troglodytes]
Length=1079
Score = 104 bits (260), Expect = 5e-29
Identities = 59/91 (65%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
Frame = -3
Query 291 SFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHV 112
SF +AG+QW DL QPPPPGFK FS LS P+SW+YRH+P C NF VETGF+HV
Sbjct 989 SFQESLRAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHV 1048
Query 111 GQAGLEPPISGNLPAWASQSVGITGVSHHAQ 19
GQA LE SG L A ASQS GITGVSHHA+
Sbjct 1049 GQAHLELLTSGGLLASASQSAGITGVSHHAR 1079
Score = 47.8 bits (112), Expect = 4e-10
Identities = 25/41 (61%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Frame = -3
Query 450 ARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPAN 328
A +Q DLSSLQPP P FK FSHLSL +SW+ R P P N
Sbjct 996 AGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTN 1036
Score = 20.0 bits (40), Expect = 0.72
Identities = 7/11 (64%), Positives = 7/11 (64%), Gaps = 0/11 (0%)
Frame = -1
Query 365 AGIAGAHHHTR 333
AGI G HH R
Sbjct 1069 AGITGVSHHAR 1079
Score = 19.6 bits (39), Expect = 0.96
Identities = 5/7 (71%), Positives = 6/7 (86%), Gaps = 0/7 (0%)
Frame = -3
Query 354 RCPPPHP 334
+CPPP P
Sbjct 864 KCPPPRP 870
Score = 18.5 bits (36), Expect = 2.2
Identities = 5/7 (71%), Positives = 6/7 (86%), Gaps = 0/7 (0%)
Frame = -2
Query 40 RCEPPRP 20
+C PPRP
Sbjct 864 KCPPPRP 870
Score = 16.9 bits (32), Expect = 7.0
Identities = 6/12 (50%), Positives = 8/12 (67%), Gaps = 0/12 (0%)
Frame = +3
Query 114 HGKTPSLLKIQN 149
HG +P+LL N
Sbjct 713 HGDSPNLLIADN 724
> gi|33188429|ref|NP_872601.1| histone demethylase UTY isoform
1 [Homo sapiens]
Length=1079
Score = 104 bits (259), Expect = 6e-29
Identities = 59/91 (65%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
Frame = -3
Query 291 SFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHV 112
SF +AG+QW DL QPPPPGFK FS LS P+SW+YRH+P C NF VETGF+HV
Sbjct 989 SFQESLRAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHV 1048
Query 111 GQAGLEPPISGNLPAWASQSVGITGVSHHAQ 19
GQA LE SG L A ASQS GITGVSHHA+
Sbjct 1049 GQACLELLTSGGLLASASQSAGITGVSHHAR 1079
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 662354
Database: minirefseq_prot
Posted date: Jun 9, 2012 2:05 PM
Number of letters in database: 6,406
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 12
Window for multiple hits: 40
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