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LOCUS GU949562 717 bp DNA linear BCT 30-JUL-2010
DEFINITION Shewanella sp. MAR_280_P06_2010-01-20 16S ribosomal RNA gene,
partial sequence.
ACCESSION GU949562
VERSION GU949562.1
KEYWORDS GSC:MIENS:2.1.
SOURCE Shewanella sp. MAR_280_P06_2010-01-20
ORGANISM Shewanella sp. MAR_280_P06_2010-01-20
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Shewanellaceae; Shewanella.
REFERENCE 1 (bases 1 to 717)
AUTHORS Hankeln,W., Buttigieg,P.L., Fink,D., Kottmann,R., Yilmaz,P. and
Glockner,F.O.
TITLE MetaBar - a tool for consistent contextual data acquisition and
standards compliant submission
JOURNAL BMC Bioinformatics 11, 358 (2010)
PUBMED 20591175
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 717)
AUTHORS Hankeln,W., Buttigieg,P.L., Fink,D., Kottman,R., Yilmaz,P. and
Gloeckner,F.O.
TITLE Direct Submission
JOURNAL Submitted (02-MAR-2010) Microbial Genomics Group, Max Planck
Institute for Marine Microbiology, Celsiusstr. 1, Bremen 28359,
Germany
COMMENT ##MIENS-Data-START##
collection_date :: 2009-10-14
collection_time :: 09:38:00
lat_lon :: 55.02814 8.45248
geodetic_datum :: WGS84
lat_long_details :: 11 m recorded accuracy
site :: German Wadden Sea, Sylt
depth :: -1.0 m
samp_size :: 1000.0 ml
temperature :: 10.155 degrees Celsius
container :: 10 ml glass exetainers
environment :: Temperate shelf and sea biome
[ENVO:00000895], coastal water body
[ENVO:02000049], coastal water
[ENVO:00002150]
alt_elev :: 0 m
country :: Germany
investigation_type :: miens-survey
project_name :: Marine Microbiology (MarMic) class 2013 field
excursion to Sylt, 2009
sequencing_meth :: Sanger
target_gene :: 16S rRNA
MetaBar_barcode :: 1000009000039
##MIENS-Data-END##
FEATURES Location/Qualifiers
source 1..717
/organism="Shewanella sp. MAR_280_P06_2010-01-20"
/mol_type="genomic DNA"
/strain="MAR_280_P06_2010-01-20"
/db_xref="taxon:748143"
/lat_lon="55.03 N 8.45 E"
/collection_date="14-Oct-2009"
/collected_by="Olga Matantseva"
rRNA <1..>717
/product="16S ribosomal RNA"
ORIGIN
1 tcagattgaa cgcggcggca ggcctaacac atgcaagtcg agcggtaaca ggaattagct
61 tgctaatttg ctgacgagcg gcggacgggt gagtaatgcc tagggaactg cccagtcgag
121 ggggataaca gttggaaacg actgctaata ccgcatacgc cctacggggg aaaagagggg
181 accttcgggc cttctgcgat tggatgtacc taggtgggat tagctagttg gtgaggtaat
241 ggctcaccaa ggcgacgatc cctagctgtt tgagaggatg atcagccaca ctgggactga
301 gacacggccc agactcctac gggaggcagc agtggggaat attgcacaat gggcgcaagc
361 ctgatgcagc catgccgcgt gtgtgaagaa gcttcgggtt gtaaagcact ttcagcgagg
421 aggaaagaat agcgtttagg tgtgacgtta ctcgcagaag aaggaccggc taacttcgtg
481 ccagcagccg cggtaatacg aggggtcaac gttaatcgga attactgggc gtaaagcgta
541 cgcaggcggt ttgttaagcg agatgtgaaa gccccgggct caacctggga actgcatttc
601 gaactggcaa actagagtct gtagaggggg gtagaatttc aggtgtagcg gtgaaatgaa
661 gatctgaagg aataccggtg gcgaaggcgg ccccctggac aaagactgac gctcatg
//
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