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# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord
# target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
sp|Q9WUT3|KS6A2_MOUSE - 733 Pkinase PF00069.17 260 8.5e-147 492.3 0.0 1 2 2.6e-75 3.6e-70 241.2 0.0 1 260 59 318 59 318 0.95 Ribosomal protein S6 kinase alpha-2 OS=Mus musculus GN=Rps6ka2 PE=1 SV=1
sp|Q9WUT3|KS6A2_MOUSE - 733 Pkinase PF00069.17 260 8.5e-147 492.3 0.0 2 2 8.6e-78 1.2e-72 249.3 0.0 1 260 415 672 415 672 0.97 Ribosomal protein S6 kinase alpha-2 OS=Mus musculus GN=Rps6ka2 PE=1 SV=1
sp|Q63531|KS6A1_RAT - 735 Pkinase PF00069.17 260 2.7e-146 490.7 0.0 1 2 1.1e-74 1.4e-69 239.2 0.0 1 258 62 319 62 321 0.94 Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus GN=Rps6ka1 PE=1 SV=1
sp|Q63531|KS6A1_RAT - 735 Pkinase PF00069.17 260 2.7e-146 490.7 0.0 2 2 6.5e-78 8.8e-73 249.7 0.0 2 260 419 675 418 675 0.97 Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus GN=Rps6ka1 PE=1 SV=1
sp|Q15418|KS6A1_HUMAN - 735 Pkinase PF00069.17 260 2.2e-145 487.7 0.0 1 2 1.6e-74 2.2e-69 238.6 0.0 1 258 62 319 62 321 0.94 Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2
sp|Q15418|KS6A1_HUMAN - 735 Pkinase PF00069.17 260 2.2e-145 487.7 0.0 2 2 3.4e-77 4.7e-72 247.4 0.0 1 260 418 675 418 675 0.97 Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2
sp|P18652|KS6AA_CHICK - 752 Pkinase PF00069.17 260 2.6e-145 487.5 0.0 1 2 1.2e-74 1.6e-69 239.0 0.0 1 259 80 338 80 339 0.95 Ribosomal protein S6 kinase 2 alpha OS=Gallus gallus GN=RPS6KA PE=2 SV=1
sp|P18652|KS6AA_CHICK - 752 Pkinase PF00069.17 260 2.6e-145 487.5 0.0 2 2 5.6e-77 7.6e-72 246.7 0.0 1 260 435 692 435 692 0.97 Ribosomal protein S6 kinase 2 alpha OS=Gallus gallus GN=RPS6KA PE=2 SV=1
#
# Program: hmmsearch
# Version: 3.1b1 (May 2013)
# Pipeline mode: SEARCH
# Query file: prot_multi.hmm
# Target file: /home/bow/db/hmmer/protdb/uniprot_sprot.fasta
# Option settings: hmmsearch -o hmmsearch/text_31b1_hmmsearch_001.out --tblout hmmsearch/tab_31b1_hmmsearch_001.out --domtblout hmmsearch/domtab_31b1_hmmsearch_001.out --pfamtblout hmmsearch/pfamtab_31b1_hmmsearch_001.out -T 485 --cpu 2 prot_multi.hmm /home/bow/db/hmmer/protdb/uniprot_sprot.fasta
# Current dir: /home/bow/devel/sandbox/biopy_cases
# Date: Mon May 26 19:15:42 2014
# [ok]
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