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# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target
#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------
Globin PF00042.17 gi|4885477|ref|NP_005359.1| - 1e-22 80.5 0.3 1.6e-22 79.8 0.3 1.3 1 0 0 1 1 1 1 Globin
Ig_3 PF13927.1 gi|126362951|ref|NP_001075106.1| - 9.3e-10 38.8 0.4 1.4e-09 38.3 0.4 1.3 1 0 0 1 1 1 1 Immunoglobulin domain
Ig_2 PF13895.1 gi|126362951|ref|NP_001075106.1| - 1.6e-06 28.1 0.1 2e-06 27.8 0.1 1.1 1 0 0 1 1 1 1 Immunoglobulin domain
Xpo1 PF08389.7 gi|22748937|ref|NP_065801.1| - 8.5e-34 116.6 7.8 1.2e-33 116.1 4.9 2.8 2 0 0 2 2 2 1 Exportin 1-like protein
IBN_N PF03810.14 gi|22748937|ref|NP_065801.1| - 0.0044 16.9 0.0 0.036 13.9 0.0 2.7 2 0 0 2 2 2 1 Importin-beta N-terminal domain
Rac1 PF09632.5 gi|22748937|ref|NP_065801.1| - 0.095 11.7 0.3 1.3 8.0 0.3 2.3 2 0 0 2 2 2 0 Rac1-binding domain
Pou PF00157.12 gi|125490392|ref|NP_038661.2| - 7.6e-37 124.8 0.5 1.5e-36 123.9 0.5 1.5 1 0 0 1 1 1 1 Pou domain - N-terminal to homeobox domain
Homeobox PF00046.24 gi|125490392|ref|NP_038661.2| - 1.8e-18 65.8 1.1 3.4e-18 64.9 1.1 1.5 1 0 0 1 1 1 1 Homeobox domain
HTH_31 PF13560.1 gi|125490392|ref|NP_038661.2| - 0.013 15.6 0.0 0.18 12.0 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain
Homeobox_KN PF05920.6 gi|125490392|ref|NP_038661.2| - 0.043 13.5 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 Homeobox KN domain
DUF521 PF04412.8 gi|125490392|ref|NP_038661.2| - 0.15 10.5 0.1 0.28 9.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF521)
#
# Program: hmmscan
# Version: 3.1b1 (May 2013)
# Pipeline mode: SCAN
# Query file: prot_multi.fa
# Target file: /home/bow/db/hmmer/protdb/Pfam-A.hmm
# Option settings: hmmscan -o hmmscan/text_31b1_hmmscan_001.out --tblout hmmscan/tab_31b1_hmmscan_001.out --domtblout hmmscan/domtab_31b1_hmmscan_001.out --pfamtblout hmmscan/pfamtab_31b1_hmmscan_001.out --cpu 2 /home/bow/db/hmmer/protdb/Pfam-A.hmm prot_multi.fa
# Current dir: /home/bow/devel/sandbox/biopy_cases
# Date: Sun May 11 21:26:57 2014
# [ok]
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