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|
<?xml version="1.0"?>
<BlastXML2
xmlns="http://www.ncbi.nlm.nih.gov"
xmlns:xs="http://www.w3.org/2001/XMLSchema-instance"
xs:schemaLocation="http://www.ncbi.nlm.nih.gov http://www.ncbi.nlm.nih.gov/data_specs/schema_alt/NCBI_BlastOutput2.xsd"
>
<BlastOutput2>
<report>
<Report>
<program>psiblast</program>
<version>PSIBLAST 2.15.0+</version>
<reference>Alejandro A. Sch&auml;ffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.</reference>
<search-target>
<Target>
<db>swissprot</db>
</Target>
</search-target>
<params>
<Parameters>
<matrix>BLOSUM62</matrix>
<expect>1e-30</expect>
<gap-open>11</gap-open>
<gap-extend>1</gap-extend>
<filter>F</filter>
<cbs>2</cbs>
</Parameters>
</params>
<results>
<Results>
<iterations>
<Iteration>
<iter-num>1</iter-num>
<search>
<Search>
<query-id>lcl|Query_1</query-id>
<query-len>103</query-len>
<hits>
<Hit>
<num>1</num>
<description>
<HitDescr>
<id>sp|P69428.1|</id>
<accession>P69428</accession>
<title>RecName: Full=Sec-independent protein translocase protein TatA [Escherichia coli K-12]</title>
<taxid>83333</taxid>
</HitDescr>
<HitDescr>
<id>sp|P69429.1|</id>
<accession>P69429</accession>
<title>RecName: Full=Sec-independent protein translocase protein TatA [Escherichia coli CFT073]</title>
<taxid>199310</taxid>
</HitDescr>
<HitDescr>
<id>sp|P69430.1|</id>
<accession>P69430</accession>
<title>RecName: Full=Sec-independent protein translocase protein TatA [Escherichia coli O157:H7]</title>
<taxid>83334</taxid>
</HitDescr>
<HitDescr>
<id>sp|P69431.1|</id>
<accession>P69431</accession>
<title>RecName: Full=Sec-independent protein translocase protein TatA [Shigella flexneri]</title>
<taxid>623</taxid>
</HitDescr>
</description>
<len>89</len>
<hsps>
<Hsp>
<num>1</num>
<bit-score>177.178</bit-score>
<score>448</score>
<evalue>2.3039e-58</evalue>
<identity>89</identity>
<query-from>0</query-from>
<query-to>0</query-to>
<hit-from>0</hit-from>
<hit-to>0</hit-to>
<qseq></qseq>
<hseq></hseq>
</Hsp>
</hsps>
</Hit>
<Hit>
<num>2</num>
<description>
<HitDescr>
<id>sp|P0A2H3.1|</id>
<accession>P0A2H3</accession>
<title>RecName: Full=Sec-independent protein translocase protein TatA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]</title>
<taxid>99287</taxid>
</HitDescr>
<HitDescr>
<id>sp|P0A2H4.1|</id>
<accession>P0A2H4</accession>
<title>RecName: Full=Sec-independent protein translocase protein TatA [Salmonella enterica subsp. enterica serovar Typhi]</title>
<taxid>90370</taxid>
</HitDescr>
</description>
<len>84</len>
<hsps>
<Hsp>
<num>1</num>
<bit-score>142.51</bit-score>
<score>358</score>
<evalue>1.0691e-44</evalue>
<identity>75</identity>
<query-from>0</query-from>
<query-to>0</query-to>
<hit-from>0</hit-from>
<hit-to>0</hit-to>
<qseq></qseq>
<hseq></hseq>
</Hsp>
</hsps>
</Hit>
</hits>
<stat>
<Statistics>
<db-num>482816</db-num>
<db-len>183558113</db-len>
<hsp-len>72</hsp-len>
<eff-space>4627826878</eff-space>
<kappa>0.041</kappa>
<lambda>0.267</lambda>
<entropy>0.14</entropy>
</Statistics>
</stat>
</Search>
</search>
</Iteration>
</iterations>
</Results>
</results>
</Report>
</report>
</BlastOutput2>
</BlastXML2>
|
