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<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>rpsblast</BlastOutput_program>
<BlastOutput_version>RPSBLAST 2.9.0+</BlastOutput_version>
<BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>cdd_delta</BlastOutput_db>
<BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
<BlastOutput_query-def>gi|269914405|pdb|3FAJ|A Chain A, Structure of the structural protein P131 of the archaeal virus Acidianus Two-tailed virus (ATV)</BlastOutput_query-def>
<BlastOutput_query-len>151</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_matrix>BLOSUM62</Parameters_matrix>
<Parameters_expect>1</Parameters_expect>
<Parameters_gap-open>11</Parameters_gap-open>
<Parameters_gap-extend>1</Parameters_gap-extend>
<Parameters_filter>F</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_query-ID>Query_1</Iteration_query-ID>
<Iteration_query-def>gi|269914405|pdb|3FAJ|A Chain A, Structure of the structural protein P131 of the archaeal virus Acidianus Two-tailed virus (ATV)</Iteration_query-def>
<Iteration_query-len>151</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|CDD|180983</Hit_id>
<Hit_def>PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated.</Hit_def>
<Hit_accession>180983</Hit_accession>
<Hit_len>322</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>31.8842</Hsp_bit-score>
<Hsp_score>73</Hsp_score>
<Hsp_evalue>0.058599</Hsp_evalue>
<Hsp_query-from>95</Hsp_query-from>
<Hsp_query-to>117</Hsp_query-to>
<Hsp_hit-from>254</Hsp_hit-from>
<Hsp_hit-to>276</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>17</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>23</Hsp_align-len>
<Hsp_qseq>GFQSQPIPGEVIAQVTSNPEYQQ</Hsp_qseq>
<Hsp_hseq>GYVSQELAGERVAQVVADPEFAQ</Hsp_hseq>
<Hsp_midline>G+ SQ + GE +AQV ++PE+ Q</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|CDD|338745</Hit_id>
<Hit_def>pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III. </Hit_def>
<Hit_accession>338745</Hit_accession>
<Hit_len>67</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>27.7531</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>0.388099</Hsp_evalue>
<Hsp_query-from>57</Hsp_query-from>
<Hsp_query-to>94</Hsp_query-to>
<Hsp_hit-from>19</Hsp_hit-from>
<Hsp_hit-to>56</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>9</Hsp_identity>
<Hsp_positive>13</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>38</Hsp_align-len>
<Hsp_qseq>AGEEANARRAGDERTKEAIHAIVKMISDAMKPYRNKGS</Hsp_qseq>
<Hsp_hseq>GTGGAGPSLAGRAWAPEALVDIIRNGKGAMPAFGGDLS</Hsp_hseq>
<Hsp_midline> A AG EA+ I++ AM + S</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>29480</Statistics_db-num>
<Statistics_db-len>6494941</Statistics_db-len>
<Statistics_hsp-len>85</Statistics_hsp-len>
<Statistics_eff-space>263283306</Statistics_eff-space>
<Statistics_kappa>0.076772628</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>
|
