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<?xml version="1.0"?>
<BlastXML2
xmlns="http://www.ncbi.nlm.nih.gov"
xmlns:xs="http://www.w3.org/2001/XMLSchema-instance"
xs:schemaLocation="http://www.ncbi.nlm.nih.gov http://www.ncbi.nlm.nih.gov/data_specs/schema_alt/NCBI_BlastOutput2.xsd"
>
<BlastOutput2>
<report>
<Report>
<program>rpsblast</program>
<version>RPSBLAST 2.9.0+</version>
<reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</reference>
<search-target>
<Target>
<db>cdd_delta</db>
</Target>
</search-target>
<params>
<Parameters>
<matrix>BLOSUM62</matrix>
<expect>1</expect>
<gap-open>11</gap-open>
<gap-extend>1</gap-extend>
<filter>F</filter>
<cbs>1</cbs>
</Parameters>
</params>
<results>
<Results>
<search>
<Search>
<query-id>Query_1</query-id>
<query-title>gi|269914405|pdb|3FAJ|A Chain A, Structure of the structural protein P131 of the archaeal virus Acidianus Two-tailed virus (ATV)</query-title>
<query-len>151</query-len>
<hits>
<Hit>
<num>1</num>
<description>
<HitDescr>
<id>gnl|CDD|180983</id>
<accession>180983</accession>
<title>PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated.</title>
</HitDescr>
</description>
<len>322</len>
<hsps>
<Hsp>
<num>1</num>
<bit-score>31.8842</bit-score>
<score>73</score>
<evalue>0.058599</evalue>
<identity>11</identity>
<positive>17</positive>
<query-from>95</query-from>
<query-to>117</query-to>
<hit-from>254</hit-from>
<hit-to>276</hit-to>
<align-len>23</align-len>
<gaps>0</gaps>
<qseq>GFQSQPIPGEVIAQVTSNPEYQQ</qseq>
<hseq>GYVSQELAGERVAQVVADPEFAQ</hseq>
<midline>G+ SQ + GE +AQV ++PE+ Q</midline>
</Hsp>
</hsps>
</Hit>
<Hit>
<num>2</num>
<description>
<HitDescr>
<id>gnl|CDD|338745</id>
<accession>338745</accession>
<title>pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III. </title>
</HitDescr>
</description>
<len>67</len>
<hsps>
<Hsp>
<num>1</num>
<bit-score>27.7531</bit-score>
<score>62</score>
<evalue>0.388099</evalue>
<identity>9</identity>
<positive>13</positive>
<query-from>57</query-from>
<query-to>94</query-to>
<hit-from>19</hit-from>
<hit-to>56</hit-to>
<align-len>38</align-len>
<gaps>0</gaps>
<qseq>AGEEANARRAGDERTKEAIHAIVKMISDAMKPYRNKGS</qseq>
<hseq>GTGGAGPSLAGRAWAPEALVDIIRNGKGAMPAFGGDLS</hseq>
<midline> A AG EA+ I++ AM + S</midline>
</Hsp>
</hsps>
</Hit>
</hits>
<stat>
<Statistics>
<db-num>29480</db-num>
<db-len>6494941</db-len>
<hsp-len>85</hsp-len>
<eff-space>263283306</eff-space>
<kappa>0.076772628</kappa>
<lambda>0.267</lambda>
<entropy>0.14</entropy>
</Statistics>
</stat>
</Search>
</search>
</Results>
</results>
</Report>
</report>
</BlastOutput2>
</BlastXML2>
|
