File: dna_rna.sam

package info (click to toggle)
python-biopython 1.85%2Bdfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 126,372 kB
  • sloc: xml: 1,047,995; python: 332,722; ansic: 16,944; sql: 1,208; makefile: 140; sh: 81
file content (30 lines) | stat: -rw-r--r-- 3,335 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
@HD	VN:1.0	SO:unsorted
@SQ	SN:chr1	LN:248956422	M5:2648ae1bacce4ec4b6cf337dcae37816	AS:hg38	SP:Homo sapiens
@SQ	SN:chr10	LN:133797422	M5:907112d17fcb73bcab1ed1c72b97ce68	AS:hg38	SP:Homo sapiens
@SQ	SN:chr11	LN:135086622	M5:1511375dc2dd1b633af8cf439ae90cec	AS:hg38	SP:Homo sapiens
@SQ	SN:chr12	LN:133275309	M5:e81e16d3f44337034695a29b97708fce	AS:hg38	SP:Homo sapiens
@SQ	SN:chr13	LN:114364328	M5:17dab79b963ccd8e7377cef59a54fe1c	AS:hg38	SP:Homo sapiens
@SQ	SN:chr14	LN:107043718	M5:acbd9552c059d9b403e75ed26c1ce5bc	AS:hg38	SP:Homo sapiens
@SQ	SN:chr15	LN:101991189	M5:f036bd11158407596ca6bf3581454706	AS:hg38	SP:Homo sapiens
@SQ	SN:chr16	LN:90338345	M5:24e7cabfba3548a2bb4dff582b9ee870	AS:hg38	SP:Homo sapiens
@SQ	SN:chr17	LN:83257441	M5:a8499ca51d6fb77332c2d242923994eb	AS:hg38	SP:Homo sapiens
@SQ	SN:chr18	LN:80373285	M5:11eeaa801f6b0e2e36a1138616b8ee9a	AS:hg38	SP:Homo sapiens
@SQ	SN:chr19	LN:58617616	M5:b0eba2c7bb5c953d1e06a508b5e487de	AS:hg38	SP:Homo sapiens
@SQ	SN:chr2	LN:242193529	M5:4bb4f82880a14111eb7327169ffb729b	AS:hg38	SP:Homo sapiens
@SQ	SN:chr20	LN:64444167	M5:b18e6c531b0bd70e949a7fc20859cb01	AS:hg38	SP:Homo sapiens
@SQ	SN:chr21	LN:46709983	M5:2f45a3455007b7e271509161e52954a9	AS:hg38	SP:Homo sapiens
@SQ	SN:chr22	LN:50818468	M5:221733a2a15e2de66d33e73d126c5109	AS:hg38	SP:Homo sapiens
@SQ	SN:chr3	LN:198295559	M5:a48af509898d3736ba95dc0912c0b461	AS:hg38	SP:Homo sapiens
@SQ	SN:chr4	LN:190214555	M5:3210fecf1eb92d5489da4346b3fddc6e	AS:hg38	SP:Homo sapiens
@SQ	SN:chr5	LN:181538259	M5:f7f05fb7ceea78cbc32ce652c540ff2d	AS:hg38	SP:Homo sapiens
@SQ	SN:chr6	LN:170805979	M5:6a48dfa97e854e3c6f186c8ff973f7dd	AS:hg38	SP:Homo sapiens
@SQ	SN:chr7	LN:159345973	M5:94eef2b96fd5a7c8db162c8c74378039	AS:hg38	SP:Homo sapiens
@SQ	SN:chr8	LN:145138636	M5:c67955b5f7815a9a1edfaa15893d3616	AS:hg38	SP:Homo sapiens
@SQ	SN:chr9	LN:138394717	M5:addd2795560986b7491c40b1faa3978a	AS:hg38	SP:Homo sapiens
@SQ	SN:chrM	LN:16569	M5:c68f52674c9fb33aef52dcf399755519	AS:hg38	SP:Homo sapiens
@SQ	SN:chrX	LN:156040895	M5:49527016a48497d9d1cbd8e4a9049bd3	AS:hg38	SP:Homo sapiens
@SQ	SN:chrY	LN:57227415	M5:b2b7e6369564d89059e763cd6e736837	AS:hg38	SP:Homo sapiens
NR_046654.1	16	chr3	42530896	0	63M1062N75M468N43M	*	0	0	CGGAAGTACTTCTGGGGGTACATACTCATCGGCTGGGGTATGGTACCAGGGAGGGCTTCCAGGCAGTTCTTCCTTGAGCGTAAGCGGATTGGGAGCACAGTCCTTAGGGATTTGAAGGAGGTAGAGTTCCCGGATGACCTAGCATCCTTCCCAGGTATGCATCTGCTGCCAAGCCAGGGAG	*	MD:Z:181	AS:i:1000	NM:i:0
NR_046654.1_modified	16	chr3	42530896	0	5S27M3I36M1062N17M2D56M468N43M3S	*	0	0	AAAAACGGAAGTACTTCTGGGGGTACATACTCCCCATCGGCTGGGGTATGGTACCAGGGAGGGCTTCCAGGCAGTTCTTCCTTGAGCGAGCGGATTGGGTGCACAGTCCTTAGGGATTTGAAGGAGGTAGAGTTCCCGGATGACCTAGCATCCTTCCCAGGTATGCATCTGCTGCCAAGCCAGGGAGAAA	*	MD:Z:80^TA11A87	AS:i:978	NM:i:6
NR_111921.1	0	chr3	48663768	0	46M1827N82M3376N76M12H	*	0	0	CACGAGAGGAGCGGAGGCGAGGGGTGAACGCGGAGCACTCCAATCGCTCCCAACTAGAGGTCCACCCAGGACCCAGAGACCTGGATTTGAGGCTGCTGGGCGGCAGATGGAGCGATCAGAAGACCAGGAGACGGGAGCTGGAGTGCAGTGGCTGTTCACAAGCGTGAAAGCAAAGATTAAAAAATTTGTTTTTATATTAAAAAA	*	MD:Z:204	AS:i:1000	NM:i:0
NR_111921.1_modified	0	chr3	48663768	0	3S28M1D17M1827N76M2I6M3376N76M12H	*	0	0	AAACACGAGAGGAGCGGAGGCGAGGGGTGAAGCGGAGCACTCCAATCGCTCCCAACTAGAGGTCCACCCAGGACCCAGAGACCTGGATTTGAGGCTGCTGCCCGGCAGATGGAGCGATCAGAAGCCACCAGGAGACGGGAGCTGGAGTGCAGTGGCTGTTCACAAGCGTGAAAGCAAAGATTAAAAAATTTGTTTTTATATTAAAAAA	*	MD:Z:28^C69G0G104	AS:i:972	NM:i:5