1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
|
MSAPROBS version 0.9.7 multiple sequence alignment
V_Harveyi_PATH MKNW--------IKV----AVAAI-A--LSAA-------------------TVQAATEVK
B_subtilis_YXEM MKMKKW------TVL----VVAALLA-VLSACGN------------G-NSSSKEDDNVLH
FLIY_ECOLI MKLAHLGRQALMGVM----AVALVAG--MSVKSF---------ADEG-LLNKVKERGTLL
Deinococcus_radiodurans MKKSLL------SLKLSGLLVPSVLALSLSACSS---------------PSSTLNQGTLK
B_subtilis_GlnH_homo_YCKK MKKALL------ALF----MVVSIAA--LAACGAGNDNQSKDNAKDGDLWASIKKKGVLT
YA80_HAEIN MKKLLF------TTA----LLTGAIA--FSTFS-----------HAGEIADRVEKTKTLL
E_coli_GlnH MKSVL-------KVS----LAALTLA--FAVSSH---------A----------ADKKLV
HISJ_E_COLI MKKLVL------SLS----LV---LA--FSSATA---------------A-FAAIPQNIR
** . :: *. *: :
V_Harveyi_PATH VGMSGRYFPFTFVK--QDKLQGFEVDMWDEIGKRNDYKIEYVTANFSGLFGLLETGRIDT
B_subtilis_YXEM VGATGQSYPFAYKE--NGKLTGFDVEVMEAVAKKIDMKLDWKLLEFSGLMGELQTGKLDT
FLIY_ECOLI VGLEGTYPPFSFQGD-DGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDV
Deinococcus_radiodurans IAMEGTYPPFTSKNE-QGELVGFDVDIAKAVAQKLNLKPEFVLTEWSGILAGLQANKYDV
B_subtilis_GlnH_homo_YCKK VGTEGTYEPFTYHDKDTDKLTGYDVEVITEVAKRLGLKVDFKETQWGSMFAGLNSKRFDV
YA80_HAEIN VGTEGTYAPFTFHDK-SGKLTGFDVEVIRKVAEKLGLKVEFKETQWDAMYAGLNAKRFDV
E_coli_GlnH VATDTAFVPFEFKQ--GDKYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDL
HISJ_E_COLI IGTDPTYAPFESKNS-QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDA
:. ** . .: *::::. : :. . ..: *.: . *
V_Harveyi_PATH ISNQITMTDARKAKYLFADPYVVDGAQITVRK-GNDSIQGVEDLAGKTVAVNLGSNFEQL
B_subtilis_YXEM ISNQVAVTDERKETYNFTKPYAYAGTQIVVKK-DNTDIKSVDDLKGKTVAAVLGSNHAKN
FLIY_ECOLI VINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEW
Deinococcus_radiodurans IVNQVGITPERQNSIGFSQPYAYSRPEIIVAKNNTFNPQSLADLKGKRVGSTLGSNYEKQ
B_subtilis_GlnH_homo_YCKK VANQVGKTD-REDKYDFSDKYTTSRAVVVTKK-DNNDIKSEADVKGKTSAQSLTSNYNKL
YA80_HAEIN IANQTNPSPERLKKYSFTTPYNYSGGVIVTKS-SDNSIKSFEDLKGRKSAQSATSNWGKD
E_coli_GlnH ALAGITITDERKKAIDFSDGYYKSGLLVMVKAN-NNDVKSVKDLDGKVVAVKSGTGSVDY
HISJ_E_COLI IMSSLSITEKRQQEIAFTDKLYAADSRLVVAK-NSDIQPTVESLKGKRVGVLQGTTQETF
: * *: . .. .: *: . :
V_Harveyi_PATH LRDYDKDGKINIKTYDT--GIEHDVALGRADAFIMDRLSALE-LIKKTG-LPLQLAGEPF
B_subtilis_YXEM LESKDPDKKINIKTYETQEGTLKDVAYGRVDAYVNSRTVLIA-QIKKTG-LPLKLAGDPI
FLIY_ECOLI LRQN--VQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALD-LVKKTN-DTLAVTGEAF
Deinococcus_radiodurans LI-D--TGDIKIVTYPGAPEILADLVAGRIDAAYNDRLVVNY-IIND-QKLPVRGAGQIG
B_subtilis_GlnH_homo_YCKK AT-N--A-GAKVEGVEGMAQALQMIQQARVDMTYNDKLAVLN-YLKTSGNKNVKIAFETG
YA80_HAEIN AK-A--A-GAQILVVDGLAQSLELIKQGRAEATINDKLAVLD-YFKQHPNSGLKIAYDRG
E_coli_GlnH AKAN--IKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILY-FIKTAGNGQFKAVGDSL
HISJ_E_COLI GNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSV
.: : * : . .:
V_Harveyi_PATH E-----TIQNAWPFVDNEKGRKLQAEVNKALAEMRADGTVEKISVKWFGADITK----
B_subtilis_YXEM V-----YEQVAFPFAKDDAHDKLRKKVNKALDELRKDGTLKKLSEKYFNEDITVEQKH
FLIY_ECOLI S-----RQESGVALRK--GNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK----
Deinococcus_radiodurans D-----AAPVGIALKK--GNSALKDQIDKALTEMRSDGTFEKISQKWFGQDVGQ---P
B_subtilis_GlnH_homo_YCKK E-----PQSTYFTFRK--GSGEVVDQVNKALKEMKEDGTLSKISKKWFGEDVSK----
YA80_HAEIN D-----KTPTAFAFLQ--GEDALITKFNQVLEALRQDGTLKQISIEWFGYDITQ----
E_coli_GlnH E-----AQQYGIAFPK--GSDELRDKVNGALKTLRENGTYNEIYKKWFGTEP-K----
HISJ_E_COLI KDEKLFGVGTGMGLRK--EDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYG---G
: .:: : .: .: :: :** . : ::*. :
|
