1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
########################################
# Program: water
# Rundate: Sat 22 Oct 2022 23:47:41
# Commandline: water
# -asequence seqA.fa
# -bsequence seqB.fa
# -gapopen 0.001
# -gapextend 0.001
# -sreverse1
# -outfile water_reverse1.txt
# Align_format: srspair
# Report_file: water_reverse1.txt
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: seqA
# 2: seqB
# Matrix: EDNAFULL
# Gap_penalty: 0.001
# Extend_penalty: 0.001
#
# Length: 121
# Identity: 32/121 (26.4%)
# Similarity: 32/121 (26.4%)
# Gaps: 89/121 (73.6%)
# Score: 159.911
#
#
#=======================================
seqA 121 GGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 72
|||||||||||||||||||
seqB 1 GGGGGGGGGGGGGGGGGGG------------------------------- 19
seqA 71 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22
seqB 19 -------------------------------------------------- 19
seqA 21 TTTTTTTTCCCCCCCCCCCCC 1
|||||||||||||
seqB 20 --------CCCCCCCCCCCCC 32
#---------------------------------------
#---------------------------------------
|
