File: exn_22_m_cdna2genome_cigar.exn

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python-biopython 1.85%2Bdfsg-4
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Command line: [exonerate -m cdna2genome ../scer_cad1.fa /media/Waterloo/Downloads/genomes/scer_s288c/scer_s288c.fa --bestn 3 --showalignment no --showcigar yes --showvulgar no]
Hostname: [blackbriar]
cigar: gi|296143771|ref|NM_001180731.1| 0 1230 + gi|330443520|ref|NC_001136.10| 1319275 1318045 - 6146  M 1 M 3 M 1226
cigar: gi|296143771|ref|NM_001180731.1| 1230 0 - gi|330443520|ref|NC_001136.10| 1318045 1319275 + 6146  M 129 M 3 M 1098
cigar: gi|296143771|ref|NM_001180731.1| 0 516 + gi|330443688|ref|NC_001145.3| 85010 667216 + 518  M 11 I 1 M 15 I 2 M 4 I 1 M 1 I 1 M 8 I 4 M 17 D 168908 M 4 D 1 M 8 I 2 M 3 I 1 M 33 D 2 M 7 D 1 M 102 D 96824 M 14 D 2 M 10 I 2 M 5 D 2 M 10 I 2 M 4 D 1 M 20 I 1 M 15 D 1 M 5 I 3 M 4 D 122118 M 20 D 5 M 6 D 193839 M 12 D 2 M 5 I 1 M 7 D 2 M 1 D 1 M 12 M 75 M 6 I 1 M 4 D 1 M 2 D 1 M 3 D 1 M 41
-- completed exonerate analysis