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Query query
Match_columns 450
No_of_seqs 336 out of 10000
Neff 5.31565
Searched_HMMs 90139
Date Fri Dec 24 23:14:30 2021
Command /mnt/home/dberenberg/gustaf_stuff/hh-suite/build/bin/hhsearch -i /tmp/tmprgvo26zr/query.a3m -o /tmp/tmprgvo26zr/output.hhr -maxseq 1000000 -cpu 2 -d /mnt/home/dberenberg/gustaf_stuff/OpenFold/pdb70/pdb70
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 7EBE_A Isocitrate lyase (E.C.4 100.0 2E-115 2E-120 931.2 0.0 433 13-449 13-553 (556)
2 7EBE_G Isocitrate lyase (E.C.4 100.0 2E-115 2E-120 931.2 0.0 433 13-449 13-553 (556)
3 7EBF_C Isocitrate lyase (E.C.4 100.0 2E-115 2E-120 931.2 0.0 433 13-449 13-553 (556)
4 6EDW_B Isocitrate lyase 2 (E.C 100.0 5E-115 5E-120 941.5 0.0 432 15-449 32-624 (786)
5 7EBC_B Isocitrate lyase (E.C.4 100.0 3E-112 3E-117 907.8 0.0 431 16-449 20-560 (563)
6 7EBC_C Isocitrate lyase (E.C.4 100.0 3E-112 3E-117 907.8 0.0 431 16-449 20-560 (563)
7 1DQU_A ISOCITRATE LYASE (E.C.4 100.0 4E-112 5E-117 904.6 0.0 428 16-447 6-538 (538)
8 3OQ8_A Isocitrate lyase (E.C.4 100.0 5E-111 6E-116 878.2 0.0 430 21-450 4-433 (433)
9 7RBX_A structural genomics, NI 100.0 2E-110 3E-115 876.1 0.0 435 16-450 16-450 (450)
10 3LG3_B Isocitrate lyase (E.C.4 100.0 8E-109 9E-114 861.7 0.0 425 19-445 3-435 (435)
11 3LG3_A Isocitrate lyase (E.C.4 100.0 3E-108 4E-113 856.3 0.0 425 19-445 3-435 (435)
12 5E9G_A Isocitrate lyase (E.C.4 100.0 2E-106 2E-111 863.0 0.0 433 13-449 12-550 (560)
13 5DQL_C Isocitrate lyase 1 (E.C 100.0 3E-106 4E-111 841.0 0.0 424 19-446 4-428 (428)
14 6XPP_B Isocitrate lyase (E.C.4 100.0 3E-106 4E-111 841.0 0.0 424 19-446 4-428 (428)
15 5E9F_B Isocitrate lyase (E.C.4 100.0 4E-106 5E-111 860.6 0.0 433 13-449 12-550 (560)
16 7CMX_B Isocitrate lyase (E.C.4 100.0 2E-105 2E-110 836.0 0.0 425 21-449 2-427 (433)
17 6G1O_A Isocitrate lyase (E.C.4 100.0 2.7E-84 3E-89 683.8 0.0 374 20-398 3-486 (486)
18 1ZLP_B petal death protein (E. 100.0 3E-37 3.3E-42 313.6 0.0 275 43-389 7-282 (318)
19 5UNC_A PHOSPHOENOLPYRUVATE PHO 100.0 4.5E-37 5E-42 314.6 0.0 263 60-392 13-277 (337)
20 3FA3_B 2,3-dimethylmalate lyas 100.0 9.1E-37 1E-41 308.0 0.0 260 65-390 4-265 (302)
21 5UNC_B PHOSPHOENOLPYRUVATE PHO 100.0 2.6E-36 2.8E-41 309.1 0.0 258 64-391 17-276 (337)
22 3EOO_A Methylisocitrate lyase 100.0 3.2E-36 3.5E-41 303.4 0.0 256 65-390 9-265 (298)
23 3FA3_F 2,3-dimethylmalate lyas 100.0 5.2E-36 5.8E-41 302.4 0.0 260 64-389 3-264 (302)
24 3FA4_C 2,3-dimethylmalate lyas 100.0 5.2E-36 5.8E-41 302.4 0.0 260 64-389 3-264 (302)
25 1OQF_B 2-methylisocitrate lyas 100.0 7.2E-36 8E-41 299.9 0.0 257 65-391 4-262 (295)
26 1M1B_A PHOSPHOENOLPYRUVATE PHO 100.0 8.7E-36 9.6E-41 299.1 0.0 258 65-392 6-266 (295)
27 1XG3_D 2-methylisocitrate lyas 100.0 2.5E-35 2.7E-40 295.8 0.0 257 65-391 4-262 (295)
28 1XG4_D Probable methylisocitra 100.0 2.5E-35 2.7E-40 295.8 0.0 257 65-391 4-262 (295)
29 3M0J_A Oxaloacetate acetyl hyd 100.0 3.7E-35 4.1E-40 297.0 0.0 262 64-390 10-273 (307)
30 4IQD_B Carboxyvinyl-carboxypho 100.0 3.8E-35 4.2E-40 296.3 0.0 285 64-430 15-300 (305)
31 4IQE_B carboxyvinyl-carboxypho 100.0 3.8E-35 4.2E-40 296.3 0.0 285 64-430 15-300 (305)
32 3LYE_A Oxaloacetate acetyl hyd 100.0 4.9E-35 5.4E-40 296.1 0.0 263 63-390 9-273 (307)
33 1S2W_A Phosphoenolpyruvate pho 100.0 7.9E-35 8.8E-40 292.4 0.0 258 64-391 5-265 (295)
34 3EOO_L Methylisocitrate lyase 100.0 5.4E-34 6E-39 286.8 0.0 256 65-390 9-265 (298)
35 3B8I_B PA4872 oxaloacetate dec 100.0 2E-33 2.3E-38 281.1 0.0 250 64-388 7-258 (287)
36 3B8I_F PA4872 oxaloacetate dec 100.0 2E-33 2.3E-38 281.1 0.0 250 64-388 7-258 (287)
37 4IQD_A Carboxyvinyl-carboxypho 99.9 6.1E-33 6.7E-38 280.5 0.0 254 64-390 15-269 (305)
38 2DUA_A Phosphonopyruvate hydro 99.9 2E-32 2.2E-37 274.2 0.0 255 66-390 3-261 (290)
39 2HJP_A Phosphonopyruvate hydro 99.9 2E-32 2.2E-37 274.2 0.0 255 66-390 3-261 (290)
40 4LSB_B lyase/mutase; Structura 99.9 3.3E-30 3.7E-35 259.4 0.0 254 62-391 14-269 (294)
41 4MG4_E Phosphonomutase; SSGCID 99.9 1.1E-29 1.2E-34 252.0 0.0 247 62-380 10-258 (261)
42 2ZE3_A DFA0005; Deinococcus fi 99.9 1.7E-28 1.8E-33 244.4 0.0 253 66-392 6-260 (275)
43 2QIW_B PEP phosphonomutase (E. 99.9 5.6E-28 6.2E-33 239.0 0.0 246 65-382 7-254 (255)
44 1O66_D 3-methyl-2-oxobutanoate 99.6 2.5E-19 2.8E-24 180.0 0.0 188 67-319 6-196 (275)
45 1O68_A 3-methyl-2-oxobutanoate 99.6 2.5E-19 2.8E-24 180.0 0.0 188 67-319 6-196 (275)
46 1O68_D 3-methyl-2-oxobutanoate 99.6 2.5E-19 2.8E-24 180.0 0.0 188 67-319 6-196 (275)
47 1M3U_A 3-methyl-2-oxobutanoate 99.6 4E-19 4.5E-24 177.4 0.0 189 67-319 6-196 (264)
48 3VAV_B 3-methyl-2-oxobutanoate 99.5 3E-18 3.4E-23 172.4 0.0 179 66-319 17-208 (275)
49 3VAV_J 3-methyl-2-oxobutanoate 99.5 3E-18 3.4E-23 172.4 0.0 179 66-319 17-208 (275)
50 1OY0_A Ketopantoate hydroxymet 99.5 1.7E-17 1.8E-22 167.6 0.0 189 66-319 22-214 (281)
51 2P10_C Mll9387 protein; PUTATI 97.4 1.3E-06 1.5E-11 88.9 0.0 149 67-246 17-172 (286)
52 2P10_D Mll9387 protein; PUTATI 97.2 3E-06 3.3E-11 86.4 0.0 149 67-246 17-172 (286)
53 7NRC_A 40S ribosomal protein S 41.4 25 0.00027 41.0 0.0 32 168-206 179-211 (1209)
54 1VR6_B Phospho-2-dehydro-3-deo 27.0 61 0.00068 35.8 0.0 65 162-228 275-339 (350)
55 4QIT_B Nitronate monooxygenase 26.8 61 0.00068 34.9 0.0 30 80-109 157-186 (357)
56 3PG9_D Phospho-2-dehydro-3-deo 26.1 65 0.00072 35.2 0.0 65 162-228 263-327 (338)
57 6M74_A L-lactate oxidase (E.C. 24.7 72 0.00079 34.3 0.0 31 78-108 232-262 (368)
No 1
>7EBE_A Isocitrate lyase (E.C.4.1.3.1); Isocitrate lyase, glyoxylate cycle, ubiquitination; HET: FMT; 2.69A {Candida albicans}
Probab=100.00 E-value=1.8e-115 Score=931.20 Aligned_cols=433 Identities=36% Similarity=0.615 Sum_probs=412.8 Template_Neff=5.300
Q query 13 EAQTQGPGSMTDFYSLIPSAPKGRFDGIERAHTAEDVKRLRGSVEIKYSLAEMGANRLWKLIHE----EDFVNALGALSG 88 (450)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~R~~~i~R~ysa~~V~~lrgs~~~~~~~a~~~a~kL~~ll~~----~~~~~~~Ga~~~ 88 (450)
........++++|++|++||.+|||++|+|||||+||++||||++++| +++.++.|||++|++ +++++++|++||
T Consensus 13 ~~~~~~~~~~~~v~~i~~~~~~~R~~~i~R~Yta~~V~~lRgs~~~~~-~~~~~a~kL~~lL~~~~~~~~~~~~~Ga~D~ 91 (556)
T 7EBE_A 13 DIQKEEADFQKEVAEIKKWWSEPRWRKTKRIYSAEDIAKKRGTLKINH-PSSQQADKLFKLLEKHDADKTVSFTFGALDP 91 (556)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSGGGTTCCCCSCHHHHHTTSCSSCCCC-THHHHHHHHHHHHHHHHHTTCCEEEEBCCSH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCcccccCCCCCCHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHcccCCCeEEEecCCCH
Confidence 334556778999999999999999999999999999999999999988 888999999999985 689999999999
Q query 89 NQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKG--------LSVDT 160 (450)
Q Consensus 89 ~~a~~~~~ag~~aiYvSG~~~a~~a~~~~~~~PD~~~yp~~tvp~~v~~i~~~~~~~~~~~~~e~~~--------~~~~~ 160 (450)
+||+++++ ||++||+|||++|++.+.+++|+||.++||+++|++.|++|++++++|||+|+.++.. .+..+
T Consensus 92 ~sA~~~a~-Gf~aiyvSG~~vSa~~g~~~~~~PD~~~~p~~ev~~~v~rI~~a~~~~Dr~q~~~~~~~~~~~r~~~~~~d 170 (556)
T 7EBE_A 92 IHVAQMAK-YLDSIYVSGWQCSSTASTSNEPSPDLADYPMDTVPNKVEHLWFAQLFHDRKQREERLTLSKEERAKTPYID 170 (556)
T ss_dssp HHHHHHTT-TCSCEEECHHHHHHHCCTTSCCCSSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTSCBCC
T ss_pred HHHHHHHh-cCCEEEEchhHHHHhccCCCCCCCCccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHccCCCCC
Confidence 99999997 9999999999999999877999999999999999999999999999999999987754 34566
Q query 161 WFAPIVADAEAGFGGPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLI 240 (450)
Q Consensus 161 ~~~PiiaDaDtG~Gg~~~~~~~~k~~ieaGaAgih~EDQ~~~~KrCGh~~gK~lvp~~e~i~~l~Aa~~a~d~~~~~~~i 240 (450)
|.+|||||+|+|||+++++++++|.|+++||+|||||||..++|||||++||+|+|+++|+.||+|||.+.|++|++++|
T Consensus 171 ~~~PIIAD~DtGfGg~~~v~~lvk~~~eAGaAGIhIEDq~~g~Kkcgh~~gk~Lvp~~e~~~RL~AAr~a~d~~g~d~vI 250 (556)
T 7EBE_A 171 FLRPIIADADTGHGGITAIIKLTKMFIERGAAGIHIEDQAPGTKKCGHMAGKVLVPVQEHINRLVAIRASADIFGSNLLA 250 (556)
T ss_dssp CCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEESBCTTSCCCTTSSCCEECCHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCcEEEeCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCccCCCCeecCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 78999999999999999999999999999999999999998899999999999999999999999999999989999999
Q query 241 VARTDAEAAKLLTSDIDERDQPFV-------------------------------------------------------- 264 (450)
Q Consensus 241 iARTDA~aa~ll~s~id~rd~~Fi-------------------------------------------------------- 264 (450)
|||||++.+++|++++|+|||+||
T Consensus 251 iARTDA~~a~li~s~~D~rDh~~I~G~~~~~~~~l~~al~ra~~~g~~~~ei~~~~~~w~~~~~Ltty~e~~~~~l~~~~ 330 (556)
T 7EBE_A 251 VARTDSEAATLITSTIDHRDHYFIIGATNPEAGDLAALMAEAESKGIYGNELAAIESEWTKKAGLKLFHEAVIDEIKNGN 330 (556)
T ss_dssp EEEECTTTCCEESCCCCGGGGGGBCEECCTTCCCHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTEECHHHHHHHHHHTSS
T ss_pred EEEecchhhhhhhccCCCCCcceeecCCCcccCcHHHHHHHHHHCCCCHHHHHHHHHHHhhhcCCccHhHHHHHHHHhCC
Confidence 999999999999999999999876
Q query 265 ----------------------------------------DYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETS 304 (450)
Q Consensus 265 ----------------------------------------d~ea~RT~EGfy~~k~gle~AIaRalA~Ap~aDliW~Et~ 304 (450)
||+.+||+||||++++|+++||+|+++|||||||+||||+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~Y~~~~g~~~aI~Ra~a~apyaDllW~Et~ 410 (556)
T 7EBE_A 331 YSNKDALIKKFTDKVNPLSHTSHKEAKKLAKELTGKDIYFNWDVARAREGYYRYQGGTQCAVMRGRAFAPYADLIWMESA 410 (556)
T ss_dssp CSSHHHHHHHHHHHSSTTSCCCHHHHHHHHHHHHSSCCCCBSSTTCCTTSCEEBCCCHHHHHHHHHHHGGGCSEEEECCS
T ss_pred CCChHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCCcCCCCCCCcccccEEecccHHHHHHHHHHhccccCEEEEeCC
Confidence 7889999999999999999999999999999999999999
Q query 305 KPDLAQARRFAEAVHKAHPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHQLNYGMFELARGYKD 384 (450)
Q Consensus 305 kPdl~~A~~FAe~V~~~~P~k~LaYN~SpSFnw~~~~~d~~i~~f~~eLa~lGy~~QfitLAGfh~~~~~~~~lA~~~~~ 384 (450)
+||+.+|++||++||++||+++|||||||||||+++|++++|++|+++|++|||+||||||+|||++++++++||+.|++
T Consensus 411 ~P~~~~a~~Fa~~i~~~~P~~~laYN~SpSFnW~~~~~~~~~~~f~~~L~klG~~~qfitlag~h~~~~~~~~~a~~~~~ 490 (556)
T 7EBE_A 411 LPDYAQAKEFADGVKAAVPDQWLAYNLSPSFNWNKAMPADEQETYIKRLGKLGYVWQFITLAGLHTTALAVDDFSNQYSQ 490 (556)
T ss_dssp SCCHHHHHHHHHHHHTTCTTCEEEEECCTTSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCcccCCCHHHHHHHHHHHHHcCCeEEEEechHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q query 385 RQMAAYSELQQAEFAAEADGYTATKHQREVGTGYFDAVSLAITGGQSSTTAMKESTETAQFKPAA 449 (450)
Q Consensus 385 ~gm~aYvelqq~e~~~~~~g~~~~~HQ~~~G~~y~D~~~~~i~gg~~st~a~~~ste~~qf~~~~ 449 (450)
+||++||++||++| ++.||++++||+|||++|+|+++++++||.++|++||+|+||+||++++
T Consensus 491 ~gm~aYv~~vQr~e--~~~g~~~~~HQ~wsGa~~~D~~~~~v~~g~sst~a~g~~~te~qf~~~~ 553 (556)
T 7EBE_A 491 IGMKAYGQTVQQPE--IEKGVEVVKHQKWSGATYIDGLLKMVSGGVTSTAAMGQGVTEDQFKESK 553 (556)
T ss_dssp HTTHHHCCCCCHHH--HHTTCGGGSHHHHHTHHHHHHHHHHHTTTCCTTCTTSTTCTTGGGC---
T ss_pred cCHHHHHHHcHHHH--HHcCCcccccCccccchHHHHHHHHHhCCcchhhhccCCCchhhccchh
Confidence 99999999999998 7889999999999999999999999999999999999999999999876
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