File: lib_10_z_5.txt

package info (click to toggle)
python-biopython 1.85%2Bdfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 126,372 kB
  • sloc: xml: 1,047,995; python: 332,722; ansic: 16,944; sql: 1,208; makefile: 140; sh: 81
file content (131 lines) | stat: -rw-r--r-- 4,217 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131

*******************************************************************************
* 
*               Library of 10 fragments, each 5 residues long
* 
*******************************************************************************


*******************************************************************************
* REFERENCE
*******************************************************************************
*
* If you use this data in research, please cite:
*
* Rachel Kolodny, Patrice Koehl, Leonidas Guibas, Michael Levitt
* Small Libraries of Protein Fragments Accurately Model Native Protein 
* Structures
*******************************************************************************


******************************************************************************
* Cluster number: 0
* Size (out of 1.0): 0.047649
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-13.974  42.846  47.708
-13.986  44.134  44.117
-16.344  41.344  43.003
-19.232  43.113  44.738
-19.040  46.335  42.683
******************************************************************************
* Cluster number: 1
* Size (out of 1.0): 0.074676
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-11.503  41.111  47.291
-13.521  43.691  45.432
-17.321  43.807  45.815
-19.355  43.053  42.631
-20.876  46.109  41.080
******************************************************************************
* Cluster number: 2
* Size (out of 1.0): 0.059053
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-12.558  44.831  46.711
-15.329  42.341  46.039
-16.503  41.319  42.549
-19.898  42.964  43.007
-18.288  46.317  43.943
******************************************************************************
* Cluster number: 3
* Size (out of 1.0): 0.070926
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-11.502  43.090  47.112
-15.236  43.214  46.361
-16.476  41.138  43.442
-19.606  43.314  43.093
-19.757  47.018  42.241
******************************************************************************
* Cluster number: 4
* Size (out of 1.0): 0.057491
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-14.333  42.954  47.832
-13.009  43.211  44.245
-16.146  41.535  42.831
-18.667  43.662  44.657
-20.422  46.410  42.684
******************************************************************************
* Cluster number: 5
* Size (out of 1.0): 0.038900
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-14.669  43.751  47.623
-13.084  41.826  44.676
-16.236  42.069  42.501
-17.529  45.558  43.209
-21.059  44.567  44.239
******************************************************************************
* Cluster number: 6
* Size (out of 1.0): 0.336197
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-14.751  43.521  47.472
-13.889  43.945  43.794
-16.364  41.232  42.750
-19.114  42.809  44.843
-18.458  46.266  43.390
******************************************************************************
* Cluster number: 7
* Size (out of 1.0): 0.077800
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-13.077  43.111  48.235
-12.885  42.188  44.617
-16.526  41.923  43.733
-18.426  44.751  42.045
-21.662  45.798  43.619
******************************************************************************
* Cluster number: 8
* Size (out of 1.0): 0.097485
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-11.460  42.273  48.325
-13.320  42.304  44.994
-16.965  43.356  44.879
-19.344  43.352  41.920
-21.487  46.487  42.130
******************************************************************************
* Cluster number: 9
* Size (out of 1.0): 0.138260
* Centeroid fragment (coordinates of CA atoms):
* X-coor Y-coor  Z-coor
 ------  ------  ------
-11.228  42.137  48.000
-14.139  41.377  45.757
-15.941  44.222  44.042
-19.653  43.799  43.302
-21.615  46.237  41.148
******************************************************************************