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# STOCKHOLM 1.0
#=GF ID HAT
#=GF AC PF02184.18
#=GF DE HAT (Half-A-TPR) repeat
#=GF AU SMART;
#=GF SE Alignment kindly provided by SMART
#=GF GA 21.00 21.00;
#=GF TC 21.00 21.00;
#=GF NC 20.90 20.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Repeat
#=GF CL CL0020
#=GF RN [1]
#=GF RM 9478129
#=GF RT The HAT helix, a repetitive motif implicated in RNA processing.
#=GF RA Preker PJ, Keller W;
#=GF RL Trends Biochem Sci 1998;23:15-16.
#=GF DR INTERPRO; IPR003107;
#=GF DR SMART; HAT;
#=GF DR SO; 0001068; polypeptide_repeat;
#=GF CC The HAT (Half A TPR) repeat is found in several RNA processing
#=GF CC proteins [1].
#=GF SQ 3
#=GF nondefaultgf Nondefault GF lines are ignored in io
#=GS CRN_DROME/191-222 AC P17886.2
#=GS CRN_DROME/191-222 nonstandardgs 42
#=GS CLF1_SCHPO/185-216 AC P87312.1
#=GS CLF1_SCHPO/185-216 DR PDB; 3JB9 R; 185-216;
#=GS O16376_CAEEL/201-233 AC O16376.2
CRN_DROME/191-222 KEIDRAREIYERFVYVH.PDVKNWIKFARFEES
#=GR CRN_DROME/191-222 nonstandardgr --------X.XXXXXXXX---------------
CLF1_SCHPO/185-216 HENERARGIYERFVVVH.PEVTNWLRWARFEEE
#=GR CLF1_SCHPO/185-216 SS --HHHHHHHHHHHHHHS.--HHHHHHHHHHHHH
O16376_CAEEL/201-233 KEIDRARSVYQRFLHVHGINVQNWIKYAKFEER
#=GC SS_cons --HHHHHHHHHHHHHHS.--HHHHHHHHHHHHH
#=GC seq_cons KEIDRARuIYERFVaVH.P-VpNWIKaARFEEc
#=GC nonstandardgc --------..........---------------
//
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