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# This code is part of the Biopython distribution and governed by its
# license. Please see the LICENSE file that should have been included
# as part of this package.
"""Tests for pairwise2 module using the pure Python fallback functions.
This test file imports the TestCases from ``pairwise2_testCases.py``.
If you want to add more tests, do this over there.
"""
import unittest
# Import all test classes deliberately:
from pairwise2_testCases import * # noqa: F401, F403
from Bio import pairwise2
if __name__ == "__main__":
runner = unittest.TextTestRunner(verbosity=2)
# Explicitly using pure Python fallback functions:
orig_make_score_matrix_fast = pairwise2._make_score_matrix_fast
orig_rint = pairwise2.rint
try:
pairwise2._make_score_matrix_fast = pairwise2._python_make_score_matrix_fast
pairwise2.rint = pairwise2._python_rint
unittest.main(testRunner=runner)
finally:
# To avoid interfering with the remaining pairwise2 tests,
# restore the original functions
pairwise2._make_score_matrix_fast = orig_make_score_matrix_fast
pairwise2.rint = orig_rint
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